RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 DCAF17Q5H9S7 520 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 TCERG1LQ5VWI1 586 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 TBC1D3GQ6DHY5 549 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 TBC1D3CQ6IPX1 549 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 TBC1D3Q8IZP1 549 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 DCBLD1Q8N8Z6 715 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 MFSD2AQ8NA29 543 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 LSM14AQ8ND56 463 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 ENOX1Q8TC92 643 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 RFFLQ8WZ73 363 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 KAT5Q92993 513 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 FAM131CQ96AQ9 280 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 MIS12Q9H081 205 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 CAAP1Q9H8G2 361 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 SARDHQ9UL12 918 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 TLR6Q9Y2C9 796 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 PIEZO2Q9H5I5 2752 aa16.99■□□□□ 0.31
SHKBP1-215ENST00000597649 RTN2O75298 545 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 GNA14O95837 355 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 ADH1BP00325 375 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 IL1BP01584 269 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 PAEPP09466 180 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 GLDCP23378 1020 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 BRD2P25440 801 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 MAT2AP31153 395 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 CCDC173Q0VFZ6 552 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 ILKQ13418 452 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 PROX2Q3B8N5 592 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 NAPEPLDQ6IQ20 393 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 TMEM270Q6UE05 265 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 ERICH1Q86X53 443 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 FAM114A1Q8IWE2 563 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 LGI2Q8N0V4 545 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 CACTIN-AS1Q8N1I8 211 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 FRS2Q8WU20 508 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 HSFY1Q96LI6 401 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 DDX50Q9BQ39 737 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 FUCA2Q9BTY2 467 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 METTL14Q9HCE5 456 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 CYTH4Q9UIA0 394 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 CA5BQ9Y2D0 317 aa16.98■□□□□ 0.31
SHKBP1-215ENST00000597649 DOCK9Q9BZ29 2069 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 SMTNL1A8MU46 457 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 BECN2A8MW95 431 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 M0QYV0 167 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 SDC3O75056 442 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 MOCS2O96007 188 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 ACP1P24666 158 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 ZNF165P49910 485 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 YWHAEP62258 255 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 MYL5Q02045 173 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 SYPL2Q5VXT5 272 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 GPR155Q7Z3F1 870 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 TAC4Q86UU9 113 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 SPACA3Q8IXA5 215 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 SLC25A45Q8N413 288 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 BAP1Q92560 729 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 SLC35C1Q96A29 364 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 TSPY26PQ9H489 355 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 THAP9Q9H5L6 903 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 ARMCX3Q9UH62 379 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 CLCA2Q9UQC9 943 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 PCDHB4Q9Y5E5 795 aa16.97■□□□□ 0.31
SHKBP1-215ENST00000597649 NAV2Q8IVL1 2488 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 TYW5A2RUC4 315 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 SIGLEC6O43699 453 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 FBXO21O94952 628 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 TACR2P21452 398 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 RPL34P49207 117 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 ELAVL3Q14576 367 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 TBC1D25Q3MII6 688 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 SLC45A4Q5BKX6 768 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 ZC3H12AQ5D1E8 599 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 RAP1GAP2Q684P5 730 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 ZNF605Q86T29 641 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 IQCHQ86VS3 1027 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 CIR1Q86X95 450 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 OXR1Q8N573 874 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 AOPEPQ8N6M6 819 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 SERPINB11Q96P15 392 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 MED15Q96RN5 788 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 BPIFA3Q9BQP9 254 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 TPX2Q9ULW0 747 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 CEP83Q9Y592 693 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 PCDHB1Q9Y5F3 818 aa16.96■□□□□ 0.31
SHKBP1-215ENST00000597649 HECTD1Q9ULT8 2610 aa16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 MOCS3O95396 460 aa16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 MT-CO3P00414 261 aa16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 TBXAS1P24557 533 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 TPM4P67936 248 aa16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 PITX1P78337 314 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 NNTQ13423 1086 aa16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 POM121L1PQ3SYA9 428 aa16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 RNF219Q5W0B1 726 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 KDM7AQ6ZMT4 941 aa16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 PRPF39Q86UA1 669 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 CCDC117Q8IWD4 279 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 UCKL1Q9NWZ5 548 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms