RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 ZNF366Q8N895 744 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 TBC1D31Q96DN5 1066 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 MRFAP1L1Q96HT8 127 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 PSMB7Q99436 277 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 NCAPGQ9BPX3 1015 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 SLC6A17Q9H1V8 727 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 ITM2CQ9NQX7 267 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 TMEM248Q9NWD8 314 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 ZNHIT6Q9NWK9 470 aaKnown RBP16.69■□□□□ 0.26
ERBB2-222ENST00000584908 SLCO3A1Q9UIG8 710 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 VPS28Q9UK41 221 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 INVSQ9Y283 1065 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 PCDHGA5Q9Y5G8 931 aa16.69■□□□□ 0.26
ERBB2-222ENST00000584908 IGHV1OR15-9A0A0B4J2B8 117 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 EIF3CLB5ME19 914 aaKnown RBP16.68■□□□□ 0.26
ERBB2-222ENST00000584908 ATP9BO43861 1147 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 RNF8O76064 485 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 HTR7P34969 479 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 GALCP54803 685 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 ZBTB16Q05516 673 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 TSR1Q2NL82 804 aaKnown RBP16.68■□□□□ 0.26
ERBB2-222ENST00000584908 C9orf64Q5T6V5 341 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 SCYL2Q6P3W7 929 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 SLC36A4Q6YBV0 504 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 CYP4V2Q6ZWL3 525 aaPredicted RBP16.68■□□□□ 0.26
ERBB2-222ENST00000584908 PYROXD2Q8N2H3 581 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 DCLK2Q8N568 766 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 GPR161Q8N6U8 529 aaKnown RBP16.68■□□□□ 0.26
ERBB2-222ENST00000584908 FRMD1Q8N878 549 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 NIPA2Q8N8Q9 360 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 DCAF4L2Q8NA75 395 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 FRS2Q8WU20 508 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 PRCCQ92733 491 aaPredicted RBP16.68■□□□□ 0.26
ERBB2-222ENST00000584908 SIPA1Q96FS4 1042 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 RPL10LQ96L21 214 aaKnown RBP16.68■□□□□ 0.26
ERBB2-222ENST00000584908 EIF3CQ99613 913 aaKnown RBP16.68■□□□□ 0.26
ERBB2-222ENST00000584908 C2orf49Q9BVC5 232 aaPredicted RBP16.68■□□□□ 0.26
ERBB2-222ENST00000584908 MUC3BQ9H195 1237 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 RSPH9Q9H1X1 276 aaPredicted RBP16.68■□□□□ 0.26
ERBB2-222ENST00000584908 MYO1AQ9UBC5 1043 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 HS3ST2Q9Y278 367 aa16.68■□□□□ 0.26
ERBB2-222ENST00000584908 CEP250Q9BV73 2442 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 GON4LQ3T8J9 2241 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 A0A0D9SEW6 157 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 EDDM13A0A1B0GTR0 161 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 TTC34A8MYJ7 566 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 AKR1B15C9JRZ8 316 aaPredicted RBP16.67■□□□□ 0.26
ERBB2-222ENST00000584908 LRCH4O75427 683 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 PCK1P35558 622 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 NNMTP40261 264 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 STK19P49842 368 aaPredicted RBP16.67■□□□□ 0.26
ERBB2-222ENST00000584908 ZNF75DP51815 510 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 KRT83P78385 493 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 GFPT1Q06210 699 aaPredicted RBP16.67■□□□□ 0.26
ERBB2-222ENST00000584908 PSTKQ8IV42 348 aaKnown RBP16.67■□□□□ 0.26
ERBB2-222ENST00000584908 PTPRN2Q92932 1015 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 ERLEC1Q96DZ1 483 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 CHP1Q99653 195 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 VPS51Q9UID3 782 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 SLC25A13Q9UJS0 675 aa16.67■□□□□ 0.26
ERBB2-222ENST00000584908 WASH4PA8MWX3 477 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 SIN3BO75182 1162 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 MIPP30301 263 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 TPMTP51580 245 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 GNA12Q03113 381 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 PIGHQ14442 188 aaPredicted RBP16.66■□□□□ 0.26
ERBB2-222ENST00000584908 PLA2G2CQ5R387 149 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 ERMARDQ5T6L9 678 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 KIAA1324Q6UXG2 1013 aaKnown RBP16.66■□□□□ 0.26
ERBB2-222ENST00000584908 LPCAT2Q7L5N7 544 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 SH2D3CQ8N5H7 860 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 TC2NQ8N9U0 490 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 ARHGEF26Q96DR7 871 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 PEBP4Q96S96 227 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 EPAS1Q99814 870 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 NUP85Q9BW27 656 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 ACE2Q9BYF1 805 aaPredicted RBP16.66■□□□□ 0.26
ERBB2-222ENST00000584908 MTG2Q9H4K7 406 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 NHEJ1Q9H9Q4 299 aaPredicted RBP16.66■□□□□ 0.26
ERBB2-222ENST00000584908 CD93Q9NPY3 652 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 NDFIP2Q9NV92 336 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 WSB2Q9NYS7 404 aaPredicted RBP16.66■□□□□ 0.26
ERBB2-222ENST00000584908 SCML1Q9UN30 329 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 CYP8B1Q9UNU6 501 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 AP4E1Q9UPM8 1137 aa16.66■□□□□ 0.26
ERBB2-222ENST00000584908 PI4KAP42356 2102 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 BCLAF3A2AJT9 711 aaKnown RBP16.65■□□□□ 0.26
ERBB2-222ENST00000584908 ZMPSTE24O75844 475 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 OXTRP30559 389 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 ETFBP38117 255 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 RPS14P62263 151 aaKnown RBP16.65■□□□□ 0.26
ERBB2-222ENST00000584908 ZNF776Q68DI1 518 aaPredicted RBP16.65■□□□□ 0.26
ERBB2-222ENST00000584908 RWDD4Q6NW29 188 aaKnown RBP16.65■□□□□ 0.26
ERBB2-222ENST00000584908 RTL3Q8N8U3 475 aaKnown RBP16.65■□□□□ 0.26
ERBB2-222ENST00000584908 OR7D4Q8NG98 312 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 FAM129BQ96TA1 746 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 HINFPQ9BQA5 517 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 SNRNP25Q9BV90 132 aaKnown RBP16.65■□□□□ 0.26
ERBB2-222ENST00000584908 MAGEH1Q9H213 219 aa16.65■□□□□ 0.26
ERBB2-222ENST00000584908 DEF6Q9H4E7 631 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms