RNA–Protein interactions for RNA: ENST00000560899.5

ETFA-218, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-218ENST00000560899 CNGA4Q8IV77 575 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 RLN3Q8WXF3 142 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 TBC1D31Q96DN5 1066 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.71■□□□□ 0.43
ETFA-218ENST00000560899 MUC3BQ9H195 1237 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 RSPH9Q9H1X1 276 aaPredicted RBP17.71■□□□□ 0.43
ETFA-218ENST00000560899 ABHD10Q9NUJ1 306 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 TMEM248Q9NWD8 314 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 MPP6Q9NZW5 540 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 SLC25A13Q9UJS0 675 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 VPS28Q9UK41 221 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 FZD10Q9ULW2 581 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 SCML1Q9UN30 329 aa17.71■□□□□ 0.43
ETFA-218ENST00000560899 BCLAF3A2AJT9 711 aaKnown RBP17.7■□□□□ 0.42
ETFA-218ENST00000560899 ATP9BO43861 1147 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 SRGAP2O75044 1071 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 PSMA2P25787 234 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 OXTRP30559 389 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 HOXD12P35452 270 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 SLC18A3Q16572 532 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 ASTE1Q2TB18 679 aaPredicted RBP17.7■□□□□ 0.42
ETFA-218ENST00000560899 C9orf64Q5T6V5 341 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 ZNF776Q68DI1 518 aaPredicted RBP17.7■□□□□ 0.42
ETFA-218ENST00000560899 TFAP2DQ7Z6R9 452 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 DCLK2Q8N568 766 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 ZNF366Q8N895 744 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 FRS2Q8WU20 508 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 PSMB7Q99436 277 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 PCED1AQ9H1Q7 454 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 SLC6A17Q9H1V8 727 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 ZNHIT6Q9NWK9 470 aaKnown RBP17.7■□□□□ 0.42
ETFA-218ENST00000560899 INVSQ9Y283 1065 aa17.7■□□□□ 0.42
ETFA-218ENST00000560899 FAM72CH0Y354 149 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 RNF8O76064 485 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 CYP1A2P05177 515 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 ACADMP11310 421 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 CD6P30203 668 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 PCK1P35558 622 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 MPLP40238 635 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 TPMTP51580 245 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 CLCN6P51797 869 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 ZNF135P52742 658 aaPredicted RBP17.69■□□□□ 0.42
ETFA-218ENST00000560899 LMNB2Q03252 620 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 TBX2Q13207 712 aaPredicted RBP17.69■□□□□ 0.42
ETFA-218ENST00000560899 ELAVL3Q14576 367 aaKnown RBP17.69■□□□□ 0.42
ETFA-218ENST00000560899 TSR1Q2NL82 804 aaKnown RBP17.69■□□□□ 0.42
ETFA-218ENST00000560899 FAM72AQ5TYM5 149 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 PEAR1Q5VY43 1037 aaPredicted RBP17.69■□□□□ 0.42
ETFA-218ENST00000560899 FAM72DQ6L9T8 149 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 FAM72BQ86X60 149 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 DNAAF5Q86Y56 855 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 NIPA2Q8N8Q9 360 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 RPL10LQ96L21 214 aaKnown RBP17.69■□□□□ 0.42
ETFA-218ENST00000560899 EPAS1Q99814 870 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 TRIM5Q9C035 493 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 THAP2Q9H0W7 228 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 PARD6AQ9NPB6 346 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 SEMA4GQ9NTN9 838 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 VPS51Q9UID3 782 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 SLCO3A1Q9UIG8 710 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 CYP8B1Q9UNU6 501 aa17.69■□□□□ 0.42
ETFA-218ENST00000560899 WASH4PA8MWX3 477 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 TTC34A8MYJ7 566 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 MAP3K13O43283 966 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 SIN3BO75182 1162 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 ZNF806P0C7X5 589 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 EIF4A3P38919 411 aaKnown RBP17.68■□□□□ 0.42
ETFA-218ENST00000560899 STK19P49842 368 aaPredicted RBP17.68■□□□□ 0.42
ETFA-218ENST00000560899 RPS14P62263 151 aaKnown RBP17.68■□□□□ 0.42
ETFA-218ENST00000560899 RPL6Q02878 288 aaKnown RBP17.68■□□□□ 0.42
ETFA-218ENST00000560899 GNA12Q03113 381 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 SPEM2Q0P670 501 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 TTC31Q49AM3 519 aaPredicted RBP17.68■□□□□ 0.42
ETFA-218ENST00000560899 SCYL2Q6P3W7 929 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 USP30Q70CQ3 517 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 SH2D3CQ8N5H7 860 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 ARFGAP1Q8N6T3 406 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 FRMD1Q8N878 549 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 CADM4Q8NFZ8 388 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 PTPRN2Q92932 1015 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 TRIM7Q9C029 511 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 ARRDC1-AS1Q9H2J1 176 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 VPS45Q9NRW7 570 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 DONSONQ9NYP3 566 aa17.68■□□□□ 0.42
ETFA-218ENST00000560899 WSB2Q9NYS7 404 aaPredicted RBP17.68■□□□□ 0.42
ETFA-218ENST00000560899 A0A0D9SEW6 157 aa17.67■□□□□ 0.42
ETFA-218ENST00000560899 ALOX15BO15296 676 aa17.67■□□□□ 0.42
ETFA-218ENST00000560899 FGF10O15520 208 aaPredicted RBP17.67■□□□□ 0.42
ETFA-218ENST00000560899 RNASEH1O60930 286 aaKnown RBP17.67■□□□□ 0.42
ETFA-218ENST00000560899 LRCH4O75427 683 aa17.67■□□□□ 0.42
ETFA-218ENST00000560899 PI4KAP42356 2102 aa17.67■□□□□ 0.42
ETFA-218ENST00000560899 SLC20A2Q08357 652 aa17.67■□□□□ 0.42
ETFA-218ENST00000560899 SFSWAPQ12872 951 aaKnown RBP17.67■□□□□ 0.42
ETFA-218ENST00000560899 PIGHQ14442 188 aaPredicted RBP17.67■□□□□ 0.42
ETFA-218ENST00000560899 CCDC122Q5T0U0 273 aa17.67■□□□□ 0.42
ETFA-218ENST00000560899 LYSMD4Q5XG99 296 aa17.67■□□□□ 0.42
ETFA-218ENST00000560899 RWDD4Q6NW29 188 aaKnown RBP17.67■□□□□ 0.42
ETFA-218ENST00000560899 PRR23CQ6ZRP0 262 aa17.67■□□□□ 0.42
ETFA-218ENST00000560899 CYP4V2Q6ZWL3 525 aaPredicted RBP17.67■□□□□ 0.42
ETFA-218ENST00000560899 CYP2U1Q7Z449 544 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms