RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 C15orf41Q9Y2V0 281 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 MSH4O15457 936 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 TXNP10599 105 aaKnown RBP14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 MTM1Q13496 603 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 OXNAD1Q96HP4 312 aaPredicted RBP14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 SAR1AQ9NR31 198 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 BSDC1Q9NW68 430 aaPredicted RBP14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 MEMO1Q9Y316 297 aa14.07□□□□□ -0.16
CSPG4P12-202ENST00000559989 IGSF9BQ9UPX0 1349 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 CHST10O43529 356 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 NCK1P16333 377 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 HYIQ5T013 277 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 C11orf63Q6NUN7 778 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 AMIGO1Q86WK6 493 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 OR2L3Q8NG85 312 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 PHF10Q8WUB8 498 aaKnown RBP14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 DNAJA4Q8WW22 397 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 FAM136AQ96C01 138 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 CBWD1Q9BRT8 395 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 NIF3L1Q9GZT8 377 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 AASDHPPTQ9NRN7 309 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 CCDC167Q9P0B6 97 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 C3orf18Q9UK00 162 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 TELO2Q9Y4R8 837 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 NEDD4P46934 1319 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 LOC102724428A0A0B4J2F2 783 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 CCNYL3P0C7X3 344 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 CKBP12277 381 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 CES1P23141 567 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 RPL3P39023 403 aaKnown RBP14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 HUNKP57058 714 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 SIK1P57059 783 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 HDDC3Q8N4P3 179 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 FBXO32Q969P5 355 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 SIPA1Q96FS4 1042 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 LY9Q9HBG7 655 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 IFT46Q9NQC8 304 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 MROH7-TTC4A0A0A0MT08 1334 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 SAGE2PA6NJ88 616 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 GTPBP1O00178 669 aaKnown RBP14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 PRKCEQ02156 737 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 GIPC3Q8TF64 312 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 PRCCQ92733 491 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 MRASO14807 208 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 MAGEA12P43365 314 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 PTPN5P54829 565 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 MAZP56270 477 aaKnown RBP14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 RAPSNQ13702 412 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 ENGASEQ8NFI3 743 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 TTYH1Q9H313 450 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZNF335Q9H4Z2 1342 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 F9P00740 461 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 TMEM143Q96AN5 459 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 ZMYM5Q9UJ78 669 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 KIAA1257Q9ULG3 409 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 PSMD13Q9UNM6 376 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 ABCA10Q8WWZ4 1543 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 ATMINO43313 823 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 GH1P01241 217 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 TUBA3EQ6PEY2 450 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 NET1Q7Z628 596 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 BRSK2Q8IWQ3 736 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 FAR1Q8WVX9 515 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 ANKRD7Q92527 254 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 HGH1Q9BTY7 390 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 SLC6A15Q9H2J7 730 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 VPS4AQ9UN37 437 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 PCDHGB3Q9Y5G1 929 aa14.06□□□□□ -0.16
CSPG4P12-202ENST00000559989 RHOCP08134 193 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 TAF6P49848 677 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 NR1I3Q14994 352 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 OR8H1Q8NGG4 311 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 BORCS5Q969J3 196 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 PHF20Q9BVI0 1012 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 POLD4Q9HCU8 107 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 TAS2R13Q9NYV9 303 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 MED11Q9P086 117 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 CD151P48509 253 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 GRAPQ13588 217 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 NAA30Q147X3 362 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 PTAR1Q7Z6K3 402 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 OR8H3Q8N146 312 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 GRAPLQ8TC17 118 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 BHMTQ93088 406 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 MTG1Q9BT17 334 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 SP140LQ9H930 580 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 TRPV5Q9NQA5 729 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 INTS10Q9NVR2 710 aaKnown RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 DPP3Q9NY33 737 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 ARL5CA6NH57 179 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 CCNB2O95067 398 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 BPNT1O95861 308 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 ATP4AP20648 1035 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 CKAP2Q8WWK9 683 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 MRPS31Q92665 395 aaKnown RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 MTFMTQ96DP5 389 aaKnown RBP14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 NPC1L1Q9UHC9 1359 aa14.05□□□□□ -0.16
CSPG4P12-202ENST00000559989 ANKDD1BA6NHY2 528 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms