RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 RPN1P04843 607 aaKnown RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 MYL1P05976 194 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 ITGAVP06756 1048 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 HSP90AA1P07900 732 aaKnown RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 C1SP09871 688 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 CDK4P11802 303 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 ABCB4P21439 1286 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 PIK3CAP42336 1068 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 EPHB1P54762 984 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 CXADRP78310 365 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 CFHR1Q03591 330 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 ZBTB16Q05516 673 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 INCA1Q0VD86 236 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 CCDC173Q0VFZ6 552 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 RTP5Q14D33 572 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 KNOP1Q1ED39 458 aaKnown RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 ZACNQ401N2 412 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 TTC31Q49AM3 519 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 COX20Q5RI15 118 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 MEI1Q5TIA1 1274 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 ZNF776Q68DI1 518 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 KIAA0895LQ68EN5 471 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 NCEH1Q6PIU2 408 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 UNC13DQ70J99 1090 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 CHST9Q7L1S5 443 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 RSRC2Q7L4I2 434 aaKnown RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 ATCAYQ86WG3 371 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 ERICH1Q86X53 443 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 SPACA3Q8IXA5 215 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 EID2Q8N6I1 236 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 SAP25Q8TEE9 199 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 GANCQ8TET4 914 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 WFIKKN2Q8TEU8 576 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 TAF4BQ92750 862 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 FGF11Q92914 225 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 PLD4Q96BZ4 506 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 DHX58Q96C10 678 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 C7orf25Q9BPX7 421 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 NT5C1AQ9BXI3 368 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 DUSP16Q9BY84 665 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 PABPC3Q9H361 631 aaKnown RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 CUEDC2Q9H467 287 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 MTG2Q9H4K7 406 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 FBRSQ9HAH7 460 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 EBF2Q9HAK2 575 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 SGK2Q9HBY8 427 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 APOBEC3GQ9HC16 384 aaKnown RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 SLC39A2Q9NP94 309 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 ABCB8Q9NUT2 735 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 CGNQ9P2M7 1197 aaKnown RBP6.09□□□□□ -1.43
VPS33B-207ENST00000557470 SERGEFQ9UGK8 458 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 GGA2Q9UJY4 613 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 ATP8A1Q9Y2Q0 1164 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 PIEZO2Q9H5I5 2752 aa6.09□□□□□ -1.43
VPS33B-207ENST00000557470 COL6A6A6NMZ7 2263 aa6.09□□□□□ -1.44
VPS33B-207ENST00000557470 A0A1W2PR77 199 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 RNF225M0QZC1 329 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 WNT9AO14904 365 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 HLA-DRAP01903 254 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 DLDP09622 509 aaKnown RBP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 PABPC1P11940 636 aaKnown RBP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 CD58P19256 250 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 TRIM21P19474 475 aaKnown RBP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 PDCP20941 246 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 EPHA8P29322 1005 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 CDKN1CP49918 316 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 SGSHP51688 502 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 GALCP54803 685 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 YWHAGP61981 247 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 DNM1Q05193 864 aaKnown RBP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 KCNJ12Q14500 433 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 HLTFQ14527 1009 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 TRIP4Q15650 581 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 TBC1D25Q3MII6 688 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 MPPE1Q53F39 396 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 C1orf220Q5T0J3 134 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 MBLAC2Q68D91 279 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 USP30Q70CQ3 517 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 AHI1Q8N157 1196 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 LINC00301Q8NCQ3 95 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 WFDC5Q8TCV5 224 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 CPLX3Q8WVH0 158 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 NDRG1Q92597 394 aaKnown RBP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 GOLGA1Q92805 767 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 TMEM176AQ96HP8 235 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 RSPH9Q9H1X1 276 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-207ENST00000557470 BLZF1Q9H2G9 400 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 ARNT2Q9HBZ2 717 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 GDF3Q9NR23 364 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 AASDHPPTQ9NRN7 309 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 DMAC2Q9NW81 257 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 PLXNA2O75051 1894 aa6.08□□□□□ -1.44
VPS33B-207ENST00000557470 TP53BP1Q12888 1972 aaPredicted RBP6.07□□□□□ -1.44
VPS33B-207ENST00000557470 A0A1W2PP55 124 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 C10orf142B7Z368 130 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 PYCARD-AS1I3L0S3 204 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 SPTLC2O15270 562 aa6.07□□□□□ -1.44
VPS33B-207ENST00000557470 MID1O15344 667 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms