RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 CREG2Q8IUH2 290 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 ARHGAP12Q8IWW6 846 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 AHI1Q8N157 1196 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 NPWQ8N729 165 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 WFDC5Q8TCV5 224 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 ARHGEF2Q92974 986 aaKnown RBP12.77□□□□□ -0.37
SHMT2-221ENST00000555773 TTC17Q96AE7 1141 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 ACDQ96AP0 544 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 ALG14Q96F25 216 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 SHDQ96IW2 340 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 TSGA13Q96PP4 275 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 P2RY13Q9BPV8 354 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 HERPUD2Q9BSE4 406 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 SPON2Q9BUD6 331 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 C2orf49Q9BVC5 232 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-221ENST00000555773 SLC39A8Q9C0K1 460 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 HEBP1Q9NRV9 189 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 VPS28Q9UK41 221 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 HEY1Q9Y5J3 304 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 UNC80Q8N2C7 3258 aa12.77□□□□□ -0.37
SHMT2-221ENST00000555773 A0A0D9SEW6 157 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 TBC1D3BA6NDS4 549 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-221ENST00000555773 HACD1B0YJ81 288 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 ZNF185O15231 689 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 KDELR3O43731 214 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 URI1O94763 535 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-221ENST00000555773 APODP05090 189 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 DRD1P21728 446 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 MZF1P28698 734 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-221ENST00000555773 CD70P32970 193 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 CSKP41240 450 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 TNFRSF4P43489 277 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 SOX9P48436 509 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 SLC10A2Q12908 348 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-221ENST00000555773 EIF4HQ15056 248 aaKnown RBP12.76□□□□□ -0.37
SHMT2-221ENST00000555773 MLF2Q15773 248 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-221ENST00000555773 CCNG2Q16589 344 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 PITRM1Q5JRX3 1037 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 IL31Q6EBC2 164 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 PHTF2Q8N3S3 785 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 DCAF4L2Q8NA75 395 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 OR52K2Q8NGK3 314 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 CCDC26Q8TAB7 109 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 FATE1Q969F0 183 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 CHFRQ96EP1 664 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 HMCESQ96FZ2 354 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 CELF6Q96J87 481 aaKnown RBP12.76□□□□□ -0.37
SHMT2-221ENST00000555773 MS4A14Q96JA4 679 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 ATP13A1Q9HD20 1204 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 IPO11Q9UI26 975 aaKnown RBP12.76□□□□□ -0.37
SHMT2-221ENST00000555773 CDC23Q9UJX2 597 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 MFHAS1Q9Y4C4 1052 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 HELZP42694 1942 aaKnown RBP12.76□□□□□ -0.37
SHMT2-221ENST00000555773 F5P12259 2224 aa12.76□□□□□ -0.37
SHMT2-221ENST00000555773 TCRBV7S2A1N4TA0A589 114 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 DFFAO00273 331 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 PPP1R12AO14974 1030 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 MFSD11O43934 449 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 KAT7O95251 611 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 ASLP04424 464 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 ATP5BP06576 529 aaKnown RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 POLR2EP19388 210 aaKnown RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 CCNCP24863 283 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 ACVRL1P37023 503 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 GARSP41250 739 aaKnown RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 GEMIN4P57678 1058 aaKnown RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 OTUD4Q01804 1114 aaKnown RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 GRSF1Q12849 480 aaKnown RBP eCLIP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 NOMO1Q15155 1222 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 TIGD7Q6NT04 549 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 RETSATQ6NUM9 610 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 DRICH1Q6PGQ1 229 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 ZNF852Q6ZMS4 543 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 ADIPOR2Q86V24 386 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 ZNF354CQ86Y25 554 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 APCDD1Q8J025 514 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 TERB1Q8NA31 727 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 OR7D4Q8NG98 312 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 ACTL9Q8TC94 416 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 UCMAQ8WVF2 138 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 FAM3CQ92520 227 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 HAUS1Q96CS2 278 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 OLFM3Q96PB7 478 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 NELL2Q99435 816 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 CD320Q9NPF0 282 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 ELOVL2Q9NXB9 296 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 SAE1Q9UBE0 346 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 FBXL21Q9UKT6 434 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 INTS6Q9UL03 887 aaKnown RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 MRPS17Q9Y2R5 130 aaKnown RBP12.75□□□□□ -0.37
SHMT2-221ENST00000555773 STARD13Q9Y3M8 1113 aa12.75□□□□□ -0.37
SHMT2-221ENST00000555773 MYO10Q9HD67 2058 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 GOLGA6L10A0A0M3HER8 536 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 CBX4O00257 560 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 KRIT1O00522 736 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 MCF2LO15068 1137 aa12.74□□□□□ -0.37
SHMT2-221ENST00000555773 TRIM24O15164 1050 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms