RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 VPS41P49754 854 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 SLC10A2Q12908 348 aaPredicted RBP18.08■□□□□ 0.48
PSEN1-212ENST00000555254 GPS1Q13098 491 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 ADGRF1Q5T601 910 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 HEATR6Q6AI08 1181 aaKnown RBP18.08■□□□□ 0.48
PSEN1-212ENST00000555254 FBXL22Q6P050 247 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 FBXO38Q6PIJ6 1188 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 LRRC49Q8IUZ0 686 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 YAF2Q8IY57 180 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 CMTM8Q8IZV2 173 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 RTL3Q8N8U3 475 aaKnown RBP18.08■□□□□ 0.48
PSEN1-212ENST00000555254 RSPRY1Q96DX4 576 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 ANAPC5Q9UJX4 755 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 NFU1Q9UMS0 254 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 MFHAS1Q9Y4C4 1052 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 NOTCH4Q99466 2003 aa18.08■□□□□ 0.48
PSEN1-212ENST00000555254 GOLGA6L7A0A1B0GV03 622 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 BHMG1C9JSJ3 638 aaPredicted RBP18.07■□□□□ 0.48
PSEN1-212ENST00000555254 PRAMEF12O95522 483 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 OLFM2O95897 454 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 RBL1P28749 1068 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 TNNT3P45378 269 aaPredicted RBP18.07■□□□□ 0.48
PSEN1-212ENST00000555254 RPL21P46778 160 aaKnown RBP18.07■□□□□ 0.48
PSEN1-212ENST00000555254 PLTPP55058 493 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 AP1B1Q10567 949 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 EMBQ6PCB8 327 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 VITQ6UXI7 678 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 PCGF5Q86SE9 256 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 PBXIP1Q96AQ6 731 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 PHOX2BQ99453 314 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 PRMT1Q99873 361 aaKnown RBP18.07■□□□□ 0.48
PSEN1-212ENST00000555254 TRMT61BQ9BVS5 477 aaKnown RBP18.07■□□□□ 0.48
PSEN1-212ENST00000555254 C10orf88Q9H8K7 445 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 TRPV4Q9HBA0 871 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 MPP6Q9NZW5 540 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 PAK5Q9P286 719 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 CA14Q9ULX7 337 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 NEU2Q9Y3R4 380 aa18.07■□□□□ 0.48
PSEN1-212ENST00000555254 ZNF638Q14966 1978 aaKnown RBP18.07■□□□□ 0.48
PSEN1-212ENST00000555254 IGLV3-10A0A075B6K4 115 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 TYW5A2RUC4 315 aaKnown RBP18.06■□□□□ 0.48
PSEN1-212ENST00000555254 DFFAO00273 331 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 STK25O00506 426 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 MAP3K6O95382 1288 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 GDI1P31150 447 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 CLCN6P51797 869 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 NDST2P52849 883 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 GALNT2Q10471 571 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 CEP128Q6ZU80 1094 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 HTR3CQ8WXA8 447 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 E2F7Q96AV8 911 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 OLFM3Q96PB7 478 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 SLC22A12Q96S37 553 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 TSPYL1Q9H0U9 437 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 MFSD1Q9H3U5 465 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 BRD9Q9H8M2 597 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 USP29Q9HBJ7 922 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 TMEM248Q9NWD8 314 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 CFAP97Q9P2B7 532 aa18.06■□□□□ 0.48
PSEN1-212ENST00000555254 AGO1Q9UL18 857 aaKnown RBP18.06■□□□□ 0.48
PSEN1-212ENST00000555254 ARHGAP42A6NI28 874 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 PDGFBP01127 241 aaPredicted RBP18.05■□□□□ 0.48
PSEN1-212ENST00000555254 ZSCAN5DPP0CG00 497 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 PSMC3P17980 439 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 RPL22P35268 128 aaKnown RBP18.05■□□□□ 0.48
PSEN1-212ENST00000555254 MAPKAPK2P49137 400 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 ZNF33AQ06730 810 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 P3H1Q32P28 736 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 TTC39BQ5VTQ0 682 aaPredicted RBP18.05■□□□□ 0.48
PSEN1-212ENST00000555254 IZUMO3Q5VZ72 239 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 NADSYN1Q6IA69 706 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 B4GALNT4Q76KP1 1039 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 CCDC117Q8IWD4 279 aaPredicted RBP18.05■□□□□ 0.48
PSEN1-212ENST00000555254 MFSD6LQ8IWD5 586 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 ZNF683Q8IZ20 524 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 SIX5Q8N196 739 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 USP13Q92995 863 aaPredicted RBP18.05■□□□□ 0.48
PSEN1-212ENST00000555254 IGSF8Q969P0 613 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 ASIC4Q96FT7 647 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 CELF6Q96J87 481 aaKnown RBP18.05■□□□□ 0.48
PSEN1-212ENST00000555254 LRRC3BQ96PB8 259 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 SLC2A4RGQ9NR83 387 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 TDP1Q9NUW8 608 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 SEPT10Q9P0V9 454 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 TPX2Q9ULW0 747 aaKnown RBP18.05■□□□□ 0.48
PSEN1-212ENST00000555254 ARHGAP26Q9UNA1 814 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 CCL26Q9Y258 94 aa18.05■□□□□ 0.48
PSEN1-212ENST00000555254 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.04■□□□□ 0.48
PSEN1-212ENST00000555254 C5orf60A6NFR6 353 aa18.04■□□□□ 0.48
PSEN1-212ENST00000555254 SMAPO00193 183 aa18.04■□□□□ 0.48
PSEN1-212ENST00000555254 GCATO75600 419 aa18.04■□□□□ 0.48
PSEN1-212ENST00000555254 KLKB1P03952 638 aa18.04■□□□□ 0.48
PSEN1-212ENST00000555254 ETS1P14921 441 aa18.04■□□□□ 0.48
PSEN1-212ENST00000555254 GARSP41250 739 aaKnown RBP18.04■□□□□ 0.48
PSEN1-212ENST00000555254 CDH4P55283 916 aa18.04■□□□□ 0.48
PSEN1-212ENST00000555254 ZNF177Q13360 481 aaPredicted RBP18.04■□□□□ 0.48
PSEN1-212ENST00000555254 PRKD1Q15139 912 aaPredicted RBP18.04■□□□□ 0.48
PSEN1-212ENST00000555254 TRADDQ15628 312 aa18.04■□□□□ 0.48
PSEN1-212ENST00000555254 C5orf22Q49AR2 442 aa18.04■□□□□ 0.48
PSEN1-212ENST00000555254 TIGD7Q6NT04 549 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms