RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 ARHGAP12Q8IWW6 846 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 PLD5Q8N7P1 536 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 WFIKKN2Q8TEU8 576 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 SPON2Q9BUD6 331 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 OSBPL8Q9BZF1 889 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 CIPCQ9C0C6 399 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 LRRC19Q9H756 370 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 LTB4R2Q9NPC1 389 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 NUP205Q92621 2012 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 RASA4BC9J798 803 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 K7EQS6 105 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 STK25O00506 426 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 APOL1O14791 398 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 RASA4O43374 803 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 CST8O60676 142 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 PDGFBP01127 241 aaPredicted RBP21.71■■□□□ 1.07
VPS29-206ENST00000549578 CXCR5P32302 372 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 NDST2P52849 883 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 PLK1P53350 603 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 PAFAH1B3Q15102 231 aaKnown RBP21.71■■□□□ 1.07
VPS29-206ENST00000549578 AFMIDQ63HM1 303 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 MBLAC2Q68D91 279 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 SLC9A4Q6AI14 798 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 CCDC33Q8N5R6 958 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 SORCS1Q8WY21 1168 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 ARHGEF2Q92974 986 aaKnown RBP21.71■■□□□ 1.07
VPS29-206ENST00000549578 HMCESQ96FZ2 354 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 COL25A1Q9BXS0 654 aaPredicted RBP21.71■■□□□ 1.07
VPS29-206ENST00000549578 SLC39A8Q9C0K1 460 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 MAGEH1Q9H213 219 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 ATP13A1Q9HD20 1204 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 RBM12Q9NTZ6 932 aaKnown RBP21.71■■□□□ 1.07
VPS29-206ENST00000549578 MRPS17Q9Y2R5 130 aaKnown RBP21.71■■□□□ 1.07
VPS29-206ENST00000549578 CHD5Q8TDI0 1954 aa21.71■■□□□ 1.07
VPS29-206ENST00000549578 A0A0A0MRY4 1105 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 MAP3K6O95382 1288 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 GLDCP23378 1020 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 PTPN7P35236 360 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 SERPINB6P35237 376 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 CETN2P41208 172 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 SEC13P55735 322 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 YBEYP58557 167 aaPredicted RBP21.7■■□□□ 1.07
VPS29-206ENST00000549578 GBE1Q04446 702 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 CCINQ13939 588 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 TFDP2Q14188 446 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 DMC1Q14565 340 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 IL31Q6EBC2 164 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 NUDT18Q6ZVK8 323 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 ZNF687Q8N1G0 1237 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 LZTR1Q8N653 840 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 CARD9Q9H257 536 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 MFSD1Q9H3U5 465 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 ELOVL2Q9NXB9 296 aa21.7■■□□□ 1.07
VPS29-206ENST00000549578 FAM170BA6NMN3 283 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 DFFAO00273 331 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 FANCGO15287 622 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 SNAP91O60641 907 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 POLR2EP19388 210 aaKnown RBP21.7■■□□□ 1.06
VPS29-206ENST00000549578 CTSOP43234 321 aaPredicted RBP21.7■■□□□ 1.06
VPS29-206ENST00000549578 TNFRSF4P43489 277 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 PARP15Q460N3 678 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 SEL1L2Q5TEA6 688 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 EMC10Q5UCC4 262 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 NPNTQ6UXI9 565 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 ZNF354CQ86Y25 554 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 DCAF4L2Q8NA75 395 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 FLCNQ8NFG4 579 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 CYB5D2Q8WUJ1 264 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 C16orf45Q96MC5 204 aaPredicted RBP21.7■■□□□ 1.06
VPS29-206ENST00000549578 ZDHHC4Q9NPG8 344 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 HEY1Q9Y5J3 304 aa21.7■■□□□ 1.06
VPS29-206ENST00000549578 CBX4O00257 560 aa21.69■■□□□ 1.06
VPS29-206ENST00000549578 CHRNB1P11230 501 aa21.69■■□□□ 1.06
VPS29-206ENST00000549578 ZFXP17010 805 aaPredicted RBP21.69■■□□□ 1.06
VPS29-206ENST00000549578 ETFBP38117 255 aa21.69■■□□□ 1.06
VPS29-206ENST00000549578 PAPOLAP51003 745 aaKnown RBP21.69■■□□□ 1.06
VPS29-206ENST00000549578 SLC10A2Q12908 348 aaPredicted RBP21.69■■□□□ 1.06
VPS29-206ENST00000549578 EIF4HQ15056 248 aaKnown RBP21.69■■□□□ 1.06
VPS29-206ENST00000549578 NYAP1Q6ZVC0 841 aa21.69■■□□□ 1.06
VPS29-206ENST00000549578 BBS12Q6ZW61 710 aa21.69■■□□□ 1.06
VPS29-206ENST00000549578 TTC17Q96AE7 1141 aa21.69■■□□□ 1.06
VPS29-206ENST00000549578 HAUS1Q96CS2 278 aa21.69■■□□□ 1.06
VPS29-206ENST00000549578 ACE2Q9BYF1 805 aaPredicted RBP21.69■■□□□ 1.06
VPS29-206ENST00000549578 DTLQ9NZJ0 730 aa21.69■■□□□ 1.06
VPS29-206ENST00000549578 SAE1Q9UBE0 346 aaPredicted RBP21.69■■□□□ 1.06
VPS29-206ENST00000549578 VPS51Q9UID3 782 aa21.69■■□□□ 1.06
VPS29-206ENST00000549578 HCN2Q9UL51 889 aa21.69■■□□□ 1.06
VPS29-206ENST00000549578 ATG2BQ96BY7 2078 aa21.68■■□□□ 1.06
VPS29-206ENST00000549578 NYNRINQ9P2P1 1898 aaKnown RBP21.68■■□□□ 1.06
VPS29-206ENST00000549578 TMEM221A6NGB7 291 aa21.68■■□□□ 1.06
VPS29-206ENST00000549578 M0R296 226 aa21.68■■□□□ 1.06
VPS29-206ENST00000549578 TNFRSF10AO00220 468 aa21.68■■□□□ 1.06
VPS29-206ENST00000549578 ETF1P62495 437 aaKnown RBP21.68■■□□□ 1.06
VPS29-206ENST00000549578 SERINC3Q13530 473 aa21.68■■□□□ 1.06
VPS29-206ENST00000549578 EGFLAMQ63HQ2 1017 aa21.68■■□□□ 1.06
VPS29-206ENST00000549578 ARHGAP36Q6ZRI8 547 aa21.68■■□□□ 1.06
VPS29-206ENST00000549578 ZSCAN30Q86W11 494 aa21.68■■□□□ 1.06
VPS29-206ENST00000549578 PJA1Q8NG27 643 aa21.68■■□□□ 1.06
VPS29-206ENST00000549578 NAPGQ99747 312 aaPredicted RBP21.68■■□□□ 1.06
VPS29-206ENST00000549578 C2orf49Q9BVC5 232 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms