RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 MS4A13Q5J8X5 152 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 BRMS1LQ5PSV4 323 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 GRAMD4Q6IC98 578 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 DTWD2Q8NBA8 298 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 WFDC5Q8TCV5 224 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 CLDN23Q96B33 292 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 FAF2Q96CS3 445 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 TMA16Q96EY4 203 aaKnown RBP17.87■□□□□ 0.45
HDAC7-227ENST00000548080 XPO6Q96QU8 1125 aaKnown RBP17.87■□□□□ 0.45
HDAC7-227ENST00000548080 PARD6BQ9BYG5 372 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 OSBPL6Q9BZF3 934 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 RCOR3Q9P2K3 495 aaPredicted RBP17.87■□□□□ 0.45
HDAC7-227ENST00000548080 DEC1Q9P2X7 70 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 AMACRQ9UHK6 382 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 CACNA1IQ9P0X4 2223 aa17.87■□□□□ 0.45
HDAC7-227ENST00000548080 WDFY4Q6ZS81 3184 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 K7EQS6 105 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 NCAM2O15394 837 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 APODP05090 189 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 NUMBP49757 651 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 IRAK1P51617 712 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 DYNLT1P63172 113 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 MTAPQ13126 283 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 DHX34Q14147 1143 aaKnown RBP17.86■□□□□ 0.45
HDAC7-227ENST00000548080 LRRC32Q14392 662 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 PPP2R5DQ14738 602 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 MPPE1Q53F39 396 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 EMC10Q5UCC4 262 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 TTC27Q6P3X3 843 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 C1orf228Q6PIY5 440 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 CCDC137Q6PK04 289 aaKnown RBP17.86■□□□□ 0.45
HDAC7-227ENST00000548080 C14orf80Q86SX3 495 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 PYROXD2Q8N2H3 581 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 TTC13Q8NBP0 860 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.86■□□□□ 0.45
HDAC7-227ENST00000548080 AZIN2Q96A70 460 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 SPATA6Q9NWH7 488 aaPredicted RBP17.86■□□□□ 0.45
HDAC7-227ENST00000548080 PCYOX1Q9UHG3 505 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 SLC12A6Q9UHW9 1150 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 DMGDHQ9UI17 866 aaKnown RBP17.86■□□□□ 0.45
HDAC7-227ENST00000548080 HS3ST4Q9Y661 456 aa17.86■□□□□ 0.45
HDAC7-227ENST00000548080 CISD3P0C7P0 127 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 SLC2A3P11169 496 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 DRD1P21728 446 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 ARL4AP40617 200 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 DGKGP49619 791 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 SLC7A5Q01650 507 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 DR1Q01658 176 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 SNX1Q13596 522 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 C2orf27AQ580R0 203 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 PCDH19Q8TAB3 1148 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 ATG4AQ8WYN0 398 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 RUBCNQ92622 972 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 PRMT1Q99873 361 aaKnown RBP17.85■□□□□ 0.45
HDAC7-227ENST00000548080 FRMD8P1Q9BZ68 369 aaPredicted RBP17.85■□□□□ 0.45
HDAC7-227ENST00000548080 ARHGEF38Q9NXL2 777 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 CWC15Q9P013 229 aaKnown RBP17.85■□□□□ 0.45
HDAC7-227ENST00000548080 VANGL2Q9ULK5 521 aa17.85■□□□□ 0.45
HDAC7-227ENST00000548080 TBC1D3BA6NDS4 549 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 FAM187AA6NFU0 413 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 H3BRJ5 948 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 APOC4-APOC2K7ER74 178 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 APOL1O14791 398 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 TTI1O43156 1089 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 HEXIM1O94992 359 aaKnown RBP17.84■□□□□ 0.45
HDAC7-227ENST00000548080 APOC2P02655 101 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 PTGIRP43119 386 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 RPS9P46781 194 aaKnown RBP17.84■□□□□ 0.45
HDAC7-227ENST00000548080 DGKKQ5KSL6 1271 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 SLC9A4Q6AI14 798 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 WDR93Q6P2C0 686 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 PQLC3Q8N755 202 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 TERB1Q8NA31 727 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 HJURPQ8NCD3 748 aaPredicted RBP17.84■□□□□ 0.45
HDAC7-227ENST00000548080 RPLP0P6Q8NHW5 317 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 ERLEC1Q96DZ1 483 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 CSPG4P5Q96PW8 444 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 HAPLN3Q96S86 360 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 DDX50Q9BQ39 737 aaKnown RBP17.84■□□□□ 0.45
HDAC7-227ENST00000548080 OSBPL2Q9H1P3 480 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 CHRDQ9H2X0 955 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 PRDM16Q9HAZ2 1276 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 FEZ2Q9UHY8 353 aaPredicted RBP17.84■□□□□ 0.45
HDAC7-227ENST00000548080 RAB21Q9UL25 225 aa17.84■□□□□ 0.45
HDAC7-227ENST00000548080 MYO18AQ92614 2054 aaKnown RBP17.84■□□□□ 0.45
HDAC7-227ENST00000548080 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.83■□□□□ 0.45
HDAC7-227ENST00000548080 PRRT4C9JH25 899 aa17.83■□□□□ 0.45
HDAC7-227ENST00000548080 F5H5T6 163 aa17.83■□□□□ 0.45
HDAC7-227ENST00000548080 LIASO43766 372 aa17.83■□□□□ 0.45
HDAC7-227ENST00000548080 ZFXP17010 805 aaPredicted RBP17.83■□□□□ 0.45
HDAC7-227ENST00000548080 GOT1P17174 413 aa17.83■□□□□ 0.45
HDAC7-227ENST00000548080 TGM2P21980 687 aa17.83■□□□□ 0.45
HDAC7-227ENST00000548080 MCM3P25205 808 aa17.83■□□□□ 0.45
HDAC7-227ENST00000548080 TIE1P35590 1138 aa17.83■□□□□ 0.45
HDAC7-227ENST00000548080 EIF2DP41214 584 aaKnown RBP17.83■□□□□ 0.45
HDAC7-227ENST00000548080 GRIA2P42262 883 aa17.83■□□□□ 0.45
HDAC7-227ENST00000548080 KCNJ1P48048 391 aa17.83■□□□□ 0.45
HDAC7-227ENST00000548080 HCAR3P49019 387 aa17.83■□□□□ 0.45
HDAC7-227ENST00000548080 ZNF135P52742 658 aaPredicted RBP17.83■□□□□ 0.45
HDAC7-227ENST00000548080 AUHQ13825 339 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms