RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 DBX2Q6ZNG2 339 aa13.5□□□□□ -0.25
RTN3-213ENST00000543552 OR14C36Q8NHC7 312 aa13.5□□□□□ -0.25
RTN3-213ENST00000543552 BAHD1Q8TBE0 780 aaPredicted RBP13.5□□□□□ -0.25
RTN3-213ENST00000543552 PTPRN2Q92932 1015 aa13.5□□□□□ -0.25
RTN3-213ENST00000543552 FAM129BQ96TA1 746 aa13.5□□□□□ -0.25
RTN3-213ENST00000543552 FEM1AQ9BSK4 669 aa13.5□□□□□ -0.25
RTN3-213ENST00000543552 C2orf49Q9BVC5 232 aaPredicted RBP13.5□□□□□ -0.25
RTN3-213ENST00000543552 MUC3BQ9H195 1237 aa13.5□□□□□ -0.25
RTN3-213ENST00000543552 WDCPQ9H6R7 721 aa13.5□□□□□ -0.25
RTN3-213ENST00000543552 AASDHPPTQ9NRN7 309 aa13.5□□□□□ -0.25
RTN3-213ENST00000543552 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
RTN3-213ENST00000543552 HS3ST4Q9Y661 456 aa13.5□□□□□ -0.25
RTN3-213ENST00000543552 NYNRINQ9P2P1 1898 aaKnown RBP13.5□□□□□ -0.25
RTN3-213ENST00000543552 FAM208BQ5VWN6 2430 aa13.5□□□□□ -0.25
RTN3-213ENST00000543552 ATP9BO43861 1147 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 CYP11B1P15538 503 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 ZNF18P17022 549 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 CD38P28907 300 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 CDH5P33151 784 aaPredicted RBP13.49□□□□□ -0.25
RTN3-213ENST00000543552 CXCR3P49682 368 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 SULT1E1P49888 294 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 CCDC15Q0P6D6 951 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 DRAP1Q14919 205 aaPredicted RBP13.49□□□□□ -0.25
RTN3-213ENST00000543552 MIIPQ5JXC2 388 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 FAM102AQ5T9C2 384 aaPredicted RBP13.49□□□□□ -0.25
RTN3-213ENST00000543552 ERICH1Q86X53 443 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 OXR1Q8N573 874 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 AADATQ8N5Z0 425 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 C18orf8Q96DM3 657 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 PGAP3Q96FM1 320 aaPredicted RBP13.49□□□□□ -0.25
RTN3-213ENST00000543552 SLC6A18Q96N87 628 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 NPY6RQ99463 290 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 ORAI3Q9BRQ5 295 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 TKTL2Q9H0I9 626 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 SIK2Q9H0K1 926 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 GDF3Q9NR23 364 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 PIGVQ9NUD9 493 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 AJAP1Q9UKB5 411 aaPredicted RBP13.49□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D30Q9Y2I9 924 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 SLCO1B1Q9Y6L6 691 aa13.49□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D3DA0A087WVF3 549 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D3IA0A087WXS9 549 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D3EA0A087X179 549 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D3KA0A087X1G2 549 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D3FA6NER0 549 aaPredicted RBP13.48□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D3LB9A6J9 549 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 H0Y8X5 98 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 TNFSF14O43557 240 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 MAGEC1O60732 1142 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 RHOCP08134 193 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D3HP0C7X1 549 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 PNMA6AP0CW24 399 aaPredicted RBP13.48□□□□□ -0.25
RTN3-213ENST00000543552 UCHL3P15374 230 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 GABRB2P47870 512 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 ARRB1P49407 418 aaPredicted RBP13.48□□□□□ -0.25
RTN3-213ENST00000543552 RNASE9P60153 205 aaKnown RBP13.48□□□□□ -0.25
RTN3-213ENST00000543552 DEUP1Q05D60 604 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 SLC25A52Q3SY17 297 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 C5orf22Q49AR2 442 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 KLHDC7AQ5VTJ3 777 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D3GQ6DHY5 549 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D3CQ6IPX1 549 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 LAYNQ6UX15 382 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 SETD3Q86TU7 594 aaPredicted RBP13.48□□□□□ -0.25
RTN3-213ENST00000543552 PRPF39Q86UA1 669 aaKnown RBP13.48□□□□□ -0.25
RTN3-213ENST00000543552 TBC1D3Q8IZP1 549 aaPredicted RBP13.48□□□□□ -0.25
RTN3-213ENST00000543552 GALNT15Q8N3T1 639 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 PNPLA1Q8N8W4 532 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 SERAC1Q96JX3 654 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 ELF4Q99607 663 aaPredicted RBP13.48□□□□□ -0.25
RTN3-213ENST00000543552 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 ARHGEF38Q9NXL2 777 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 FTSJ1Q9UET6 329 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 DMTF1Q9Y222 760 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 HS3ST2Q9Y278 367 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 DAAM1Q9Y4D1 1078 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 FHOD1Q9Y613 1164 aa13.48□□□□□ -0.25
RTN3-213ENST00000543552 ANKRD11Q6UB99 2663 aaPredicted RBP13.48□□□□□ -0.25
RTN3-213ENST00000543552 KNL1Q8NG31 2342 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 PKD1L2Q7Z442 2459 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 A0A1B0GTQ1 180 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 SRRM3A6NNA2 597 aaPredicted RBP13.47□□□□□ -0.25
RTN3-213ENST00000543552 F8VZ95 297 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 MCF2LO15068 1137 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 LATO43561 262 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 CLCN6P51797 869 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 DLG2Q15700 870 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 C6orf118Q5T5N4 469 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 NAPEPLDQ6IQ20 393 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.47□□□□□ -0.25
RTN3-213ENST00000543552 CCNI2Q6ZMN8 369 aaPredicted RBP13.47□□□□□ -0.25
RTN3-213ENST00000543552 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 SH2D3CQ8N5H7 860 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 DCAF4L2Q8NA75 395 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 NT5C3BQ969T7 300 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 ALG14Q96F25 216 aa13.47□□□□□ -0.25
RTN3-213ENST00000543552 C1orf74Q96LT6 269 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms