RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 GRM3Q14832 879 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 SMTNL2Q2TAL5 461 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 KRT40Q6A162 431 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 HMBOX1Q6NT76 420 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 RINT1Q6NUQ1 792 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 C15orf52Q6ZUT6 534 aaKnown RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 NELFCDQ8IXH7 590 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 C12orf50Q8NA57 414 aaPredicted RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 RBBP8NLQ8NC74 664 aaPredicted RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 OR9A1PQ8NGU1 263 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 PHOSPHO2Q8TCD6 241 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 TTC9Q92623 222 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 HDAC10Q969S8 669 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 FAR2Q96K12 515 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 BBS4Q96RK4 519 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 CAMKK2Q96RR4 588 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 OLFM1Q99784 485 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 NOC4LQ9BVI4 516 aaKnown RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 MVB12BQ9H7P6 319 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 UFSP2Q9NUQ7 469 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 UVRAGQ9P2Y5 699 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 STOML1Q9UBI4 398 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 SALL4Q9UJQ4 1053 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 GPR52Q9Y2T5 361 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 DTNAQ9Y4J8 743 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 SALL1Q9NSC2 1324 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 USP17L3A6NCW0 530 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 USP17L4A6NCW7 530 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 DNM1LO00429 736 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 DDX3YO15523 660 aaKnown RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 ENDOD1O94919 500 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 RAB3DO95716 219 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 HSD3B1P14060 373 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 MAP4P27816 1152 aaKnown RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 HTR7P34969 479 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 GSTM5P46439 218 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 STAT5BP51692 787 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 YBEYP58557 167 aaPredicted RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 PCDH1Q08174 1060 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 NFYCQ13952 458 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 PLS1Q14651 629 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 ANGPT1Q15389 498 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 AOC3Q16853 763 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 HERC4Q5GLZ8 1057 aaPredicted RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 ARHGEF16Q5VV41 709 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 GTF2IRD2BQ6EKJ0 949 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 DEGS2Q6QHC5 323 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 PRR23BQ6ZRT6 265 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 ILDR2Q71H61 639 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 USP17L1Q7RTZ2 530 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 HEATR3Q7Z4Q2 680 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 GTF2IRD2Q86UP8 949 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 SGMS1Q86VZ5 419 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 RALGPS2Q86X27 583 aaPredicted RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 DCP2Q8IU60 420 aaKnown RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 ZNF444Q8N0Y2 327 aaPredicted RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 LPPQ93052 612 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 SEC22CQ9BRL7 303 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 TMEM79Q9BSE2 394 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 TBCDQ9BTW9 1192 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 COA1Q9GZY4 146 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 MKRN2Q9H000 416 aaKnown RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 C1orf21Q9H246 121 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 SAV1Q9H4B6 383 aaPredicted RBP6.31□□□□□ -1.4
LMO3-225ENST00000541295 S100A14Q9HCY8 104 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 PANK4Q9NVE7 773 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 RPS6KA6Q9UK32 745 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 SLC22A14Q9Y267 594 aa6.31□□□□□ -1.4
LMO3-225ENST00000541295 FAM172BPA6NC97 362 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 PPP1R3GB7ZBB8 358 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 TLR5O60602 858 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 IL1R1P14778 569 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 HOXA11P31270 313 aaPredicted RBP6.3□□□□□ -1.4
LMO3-225ENST00000541295 PSMD4P55036 377 aaKnown RBP6.3□□□□□ -1.4
LMO3-225ENST00000541295 TMEM31Q5JXX7 168 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 AFMIDQ63HM1 303 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 TRMT10CQ7L0Y3 403 aaKnown RBP6.3□□□□□ -1.4
LMO3-225ENST00000541295 RIBC1Q8N443 379 aaPredicted RBP6.3□□□□□ -1.4
LMO3-225ENST00000541295 FSIP1Q8NA03 581 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 FANCBQ8NB91 859 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 TRPV1Q8NER1 839 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 OR6B3Q8NGW1 331 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 ZNF507Q8TCN5 953 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 SGF29Q96ES7 293 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 ZDHHC15Q96MV8 337 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 EHD4Q9H223 541 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 SUV39H2Q9H5I1 410 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 RC3H2Q9HBD1 1191 aaKnown RBP6.3□□□□□ -1.4
LMO3-225ENST00000541295 PSMC3IPQ9P2W1 217 aaPredicted RBP6.3□□□□□ -1.4
LMO3-225ENST00000541295 WARS2Q9UGM6 360 aaKnown RBP6.3□□□□□ -1.4
LMO3-225ENST00000541295 MAD2L2Q9UI95 211 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 CCDC88AQ3V6T2 1871 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 ANKRD31Q8N7Z5 1873 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 A0A0A6YYJ9 748 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 ILVBLA1L0T0 632 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 ARHGEF35A5YM69 484 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 KCNJ18B7U540 433 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 SLCO1B7G3V0H7 640 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 BACH1O14867 736 aa6.3□□□□□ -1.4
LMO3-225ENST00000541295 RGS13O14921 159 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms