RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 MBD3L4A6NDZ8 208 aaPredicted RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 MBD3L3A6NE82 208 aaPredicted RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 ZZEF1O43149 2961 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 TEX33O43247 280 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 STX6O43752 255 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 NARSO43776 548 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 NOL3O60936 208 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 KIAA0754O94854 1291 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 GGPS1O95749 300 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 PNPP00491 289 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 GNAI2P04899 355 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 SNRPA1P09661 255 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 LTA4HP09960 611 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 MALP21145 153 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 KLRC1P26715 233 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 PBLDP30039 288 aaPredicted RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 RFC1P35251 1148 aaPredicted RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 PGM1P36871 562 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 PSMC4P43686 418 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 HDAC4P56524 1084 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 YBEYP58557 167 aaPredicted RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 HTD2P86397 168 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 SATB1Q01826 763 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 LASP1Q14847 261 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 SMU1Q2TAY7 513 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 EMC10Q5UCC4 262 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 CD276Q5ZPR3 534 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 MTFR2Q6P444 385 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 SLC30A9Q6PML9 568 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 FIP1L1Q6UN15 594 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 PLEKHM3Q6ZWE6 761 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 USP49Q70CQ1 688 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 GAREM2Q75VX8 874 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 OTOP2Q7RTS6 562 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 KRT28Q7Z3Y7 464 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 ADGRA1Q86SQ6 560 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 FAM126BQ8IXS8 530 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 CCDC105Q8IYK2 499 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 PQLC1Q8N2U9 271 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 OR52K2Q8NGK3 314 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 GPR150Q8NGU9 434 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 SCFD2Q8WU76 684 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 ZNF480Q8WV37 535 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 CFHR4Q92496 578 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 SHC3Q92529 594 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 ZNF75CPQ92670 426 aaPredicted RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 TNPO1Q92973 898 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 PLEKHG4BQ96PX9 1271 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 GSDMAQ96QA5 445 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 LMF1Q96S06 567 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 FDXACB1Q9BRP7 624 aaPredicted RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 NTPCRQ9BSD7 190 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 MAK16Q9BXY0 300 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 ZNF518BQ9C0D4 1074 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 USP44Q9H0E7 712 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 TASP1Q9H6P5 420 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 SEC61A2Q9H9S3 476 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 SIRT3Q9NTG7 399 aaPredicted RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 ZSCAN32Q9NX65 697 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 MRPL15Q9P015 296 aaKnown RBP4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 BTBD7Q9P203 1132 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 ARHGAP20Q9P2F6 1191 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 FBLN5Q9UBX5 448 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 MED16Q9Y2X0 877 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 TRIM17Q9Y577 477 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 FRYQ5TBA9 3013 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 ADAMTSL1Q8N6G6 1762 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 KIF15Q9NS87 1388 aa4.02□□□□□ -1.77
AC055720.1-201ENST00000539552 MYBBP1AQ9BQG0 1328 aaKnown RBP4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 FBN3Q75N90 2809 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 MBD5Q9P267 1494 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 BTAF1O14981 1849 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 RGSL1A5PLK6 1076 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 ZNF839A8K0R7 811 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 CYSRT1A8MQ03 144 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 E7EVH7 732 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 BTN3A1O00481 513 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 PSMD14O00487 310 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 PGRMC2O15173 223 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 WDR46O15213 610 aaKnown RBP4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 TP73O15350 636 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 KIF1CO43896 1103 aaKnown RBP4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 TSC22D2O75157 780 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 ENTPD3O75355 529 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 OLFM2O95897 454 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 TFRCP02786 760 aaKnown RBP4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 TXNP10599 105 aaKnown RBP4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 UBL4AP11441 157 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 MAKP20794 623 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 COMTP21964 271 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 KCNA5P22460 613 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 GCH1P30793 250 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 BSGP35613 385 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 GARSP41250 739 aaKnown RBP4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 BCAT1P54687 386 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 ALDH18A1P54886 795 aaKnown RBP4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 SOX8P57073 446 aa4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 RPP30P78346 268 aaKnown RBP4.01□□□□□ -1.77
AC055720.1-201ENST00000539552 HNRNPA0Q13151 305 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms