RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 SEC14L1Q92503 715 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ANKRD7Q92527 254 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 E2F7Q96AV8 911 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ASB16Q96NS5 453 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 SLC22A12Q96S37 553 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 MYADMQ96S97 322 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 PCDH9Q9HC56 1237 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 HAUS2Q9NVX0 235 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 BCCIPQ9P287 314 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 EPS15L1Q9UBC2 864 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 PPARGC1AQ9UBK2 798 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 PRKAG3Q9UGI9 489 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 DMGDHQ9UI17 866 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 NUDT5Q9UKK9 219 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 ZNF510Q9Y2H8 683 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 R3HDM2Q9Y2K5 976 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 OBSL1O75147 1896 aa11.24□□□□□ -0.61
CCDC90B-218ENST00000533761 BCLAF3A2AJT9 711 aaKnown RBP11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 F5H5T6 163 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 IFNB1P01574 187 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 H2AFXP16104 143 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 ERCC2P18074 760 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 ITIH2P19823 946 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 HOXC13P31276 330 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 ADCY8P40145 1251 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 VSNL1P62760 191 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 ADCY2Q08462 1091 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 NAA30Q147X3 362 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 SLC45A4Q5BKX6 768 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 TTC39BQ5VTQ0 682 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 NCBP2-AS2Q69YL0 99 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 TTC27Q6P3X3 843 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 C1orf228Q6PIY5 440 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 MTSS1LQ765P7 747 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 ANKS1BQ7Z6G8 1248 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 ZDHHC14Q8IZN3 488 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 PYROXD2Q8N2H3 581 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 CELF5Q8N6W0 485 aaKnown RBP11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 SNF8Q96H20 258 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 ASB2Q96Q27 587 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 PNKPQ96T60 521 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 HERPUD2Q9BSE4 406 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 ZYG11BQ9C0D3 744 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 KIF9Q9HAQ2 790 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 TRPV4Q9HBA0 871 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 ZFP14Q9HCL3 533 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 WHRNQ9P202 907 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 ARHGAP26Q9UNA1 814 aa11.23□□□□□ -0.61
CCDC90B-218ENST00000533761 DENND4AQ7Z401 1863 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 E9PAM4 449 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 DCLK1O15075 740 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 KRT14P02533 472 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 IL9P15248 144 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 PECAM1P16284 738 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 AMPD1P23109 780 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 SP100P23497 879 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 PTGIRP43119 386 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 KCNJ1P48048 391 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 KCNQ1P51787 676 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 P3H1Q32P28 736 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 DUPD1Q68J44 220 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 CCNI2Q6ZMN8 369 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 MTERF4Q7Z6M4 381 aaKnown RBP11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 ZC3H18Q86VM9 953 aaKnown RBP11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 CHSY1Q86X52 802 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 USP13Q92995 863 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 TMEM121Q9BTD3 319 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 ACBD3Q9H3P7 528 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 SMPD4Q9NXE4 827 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 OBP2AQ9NY56 170 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 PAK5Q9P286 719 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 CPQQ9Y646 472 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 HS3ST4Q9Y661 456 aa11.22□□□□□ -0.61
CCDC90B-218ENST00000533761 C2CD4DB7Z1M9 353 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 ACSL4O60488 711 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 HMBSP08397 361 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 RHOQP17081 205 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 MAPKAPK2P49137 400 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 AUHQ13825 339 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 MS4A13Q5J8X5 152 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 MANEALQ5VSG8 457 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 TIGD7Q6NT04 549 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 CCDC117Q8IWD4 279 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 ADHFE1Q8IWW8 467 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 KIAA1958Q8N8K9 716 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 RTL3Q8N8U3 475 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 CCNYQ8ND76 341 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 NXPE3Q969Y0 559 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 RPRD1AQ96P16 312 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 PPP1R2P1Q96PQ5 205 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 QKIQ96PU8 341 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 FMO2Q99518 471 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 VAT1Q99536 393 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 TRIM51Q9BSJ1 452 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 KLF16Q9BXK1 252 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 FOXP3Q9BZS1 431 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 TRIM31Q9BZY9 425 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 SMG9Q9H0W8 520 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 DTLQ9NZJ0 730 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 SAE1Q9UBE0 346 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms