RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 LSM8O95777 96 aaKnown RBP9□□□□□ -0.97
COPB1-210ENST00000533533 MOCS2O96007 188 aaPredicted RBP9□□□□□ -0.97
COPB1-210ENST00000533533 DLDP09622 509 aaKnown RBP9□□□□□ -0.97
COPB1-210ENST00000533533 CHRNB2P17787 502 aa9□□□□□ -0.97
COPB1-210ENST00000533533 CD27P26842 260 aa9□□□□□ -0.97
COPB1-210ENST00000533533 GRK6P43250 576 aa9□□□□□ -0.97
COPB1-210ENST00000533533 NSFP46459 744 aaKnown RBP9□□□□□ -0.97
COPB1-210ENST00000533533 CCT8P50990 548 aa9□□□□□ -0.97
COPB1-210ENST00000533533 TBX4P57082 545 aa9□□□□□ -0.97
COPB1-210ENST00000533533 RPS14P62263 151 aaKnown RBP9□□□□□ -0.97
COPB1-210ENST00000533533 YWHAZP63104 245 aaKnown RBP9□□□□□ -0.97
COPB1-210ENST00000533533 NOMO3P69849 1222 aa9□□□□□ -0.97
COPB1-210ENST00000533533 CDK17Q00537 523 aa9□□□□□ -0.97
COPB1-210ENST00000533533 FMO1Q01740 532 aa9□□□□□ -0.97
COPB1-210ENST00000533533 SLC6A3Q01959 620 aa9□□□□□ -0.97
COPB1-210ENST00000533533 TTC31Q49AM3 519 aaPredicted RBP9□□□□□ -0.97
COPB1-210ENST00000533533 TDRD12Q587J7 1177 aaKnown RBP9□□□□□ -0.97
COPB1-210ENST00000533533 DCAF6Q58WW2 860 aa9□□□□□ -0.97
COPB1-210ENST00000533533 KCNT1Q5JUK3 1230 aa9□□□□□ -0.97
COPB1-210ENST00000533533 EFHC1Q5JVL4 640 aa9□□□□□ -0.97
COPB1-210ENST00000533533 ADGRF1Q5T601 910 aa9□□□□□ -0.97
COPB1-210ENST00000533533 FAM102AQ5T9C2 384 aaPredicted RBP9□□□□□ -0.97
COPB1-210ENST00000533533 LAYNQ6UX15 382 aa9□□□□□ -0.97
COPB1-210ENST00000533533 TRIM72Q6ZMU5 477 aa9□□□□□ -0.97
COPB1-210ENST00000533533 MMS22LQ6ZRQ5 1243 aa9□□□□□ -0.97
COPB1-210ENST00000533533 CHST9Q7L1S5 443 aa9□□□□□ -0.97
COPB1-210ENST00000533533 KIAA0907Q7Z7F0 614 aaPredicted RBP9□□□□□ -0.97
COPB1-210ENST00000533533 DEFB106AQ8N104 65 aa9□□□□□ -0.97
COPB1-210ENST00000533533 AHI1Q8N157 1196 aa9□□□□□ -0.97
COPB1-210ENST00000533533 DDX51Q8N8A6 666 aaKnown RBP eCLIP9□□□□□ -0.97
COPB1-210ENST00000533533 PDCD7Q8N8D1 485 aaKnown RBP9□□□□□ -0.97
COPB1-210ENST00000533533 SLC30A5Q8TAD4 765 aa9□□□□□ -0.97
COPB1-210ENST00000533533 DQX1Q8TE96 717 aaKnown RBP9□□□□□ -0.97
COPB1-210ENST00000533533 RNF34Q969K3 372 aa9□□□□□ -0.97
COPB1-210ENST00000533533 TMA16Q96EY4 203 aaKnown RBP9□□□□□ -0.97
COPB1-210ENST00000533533 AGPAT1Q99943 283 aa9□□□□□ -0.97
COPB1-210ENST00000533533 C11orf70Q9BRQ4 267 aa9□□□□□ -0.97
COPB1-210ENST00000533533 FAM204AQ9H8W3 233 aa9□□□□□ -0.97
COPB1-210ENST00000533533 POPDC2Q9HBU9 364 aa9□□□□□ -0.97
COPB1-210ENST00000533533 SGK2Q9HBY8 427 aa9□□□□□ -0.97
COPB1-210ENST00000533533 PRSS16Q9NQE7 514 aa9□□□□□ -0.97
COPB1-210ENST00000533533 ABCB8Q9NUT2 735 aa9□□□□□ -0.97
COPB1-210ENST00000533533 GGA2Q9UJY4 613 aa9□□□□□ -0.97
COPB1-210ENST00000533533 HBS1LQ9Y450 684 aaKnown RBP9□□□□□ -0.97
COPB1-210ENST00000533533 COL5A1P20908 1838 aaPredicted RBP9□□□□□ -0.97
COPB1-210ENST00000533533 A0A087WV48 116 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 DFNA5O60443 496 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 HSF2BPO75031 334 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 LATS1O95835 1130 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 DNTTP04053 509 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 ATP5BP06576 529 aaKnown RBP8.99□□□□□ -0.97
COPB1-210ENST00000533533 TPM1P09493 284 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 PABPC1P11940 636 aaKnown RBP8.99□□□□□ -0.97
COPB1-210ENST00000533533 SKILP12757 684 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 CDH5P33151 784 aaPredicted RBP8.99□□□□□ -0.97
COPB1-210ENST00000533533 CTSKP43235 329 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 RPL34P49207 117 aaKnown RBP8.99□□□□□ -0.97
COPB1-210ENST00000533533 KLHL30Q0D2K2 578 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 NME3Q13232 169 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 CLEC16AQ2KHT3 1053 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 CCDC157Q569K6 752 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 SYPL2Q5VXT5 272 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 MBLAC2Q68D91 279 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 MSANTD2Q6P1R3 559 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 OLFML1Q6UWY5 402 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 ADAT2Q7Z6V5 191 aaKnown RBP8.99□□□□□ -0.97
COPB1-210ENST00000533533 TAC4Q86UU9 113 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 BAP1Q92560 729 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 SERPINB11Q96P15 392 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 PCDHB18PQ96TA0 734 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 ORAI3Q9BRQ5 295 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.99□□□□□ -0.97
COPB1-210ENST00000533533 TRIM5Q9C035 493 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 DDIT4Q9NX09 232 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 SUN2Q9UH99 717 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 MYO6Q9UM54 1294 aa8.99□□□□□ -0.97
COPB1-210ENST00000533533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.99□□□□□ -0.976e-9■■■■■ 35.4
COPB1-210ENST00000533533 PIEZO2Q9H5I5 2752 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 ATMQ13315 3056 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 EIF4E1BA6NMX2 242 aaKnown RBP8.98□□□□□ -0.97
COPB1-210ENST00000533533 E9PAM4 449 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 VILLO15195 856 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 TRUB2O95900 331 aaKnown RBP8.98□□□□□ -0.97
COPB1-210ENST00000533533 APOEP02649 317 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 CYP1A1P04798 512 aaPredicted RBP8.98□□□□□ -0.97
COPB1-210ENST00000533533 FYNP06241 537 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 IGHV4-34P06331 123 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 GLI1P08151 1106 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 POLR2EP19388 210 aaKnown RBP8.98□□□□□ -0.97
COPB1-210ENST00000533533 CD70P32970 193 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 SLC11A2P49281 568 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 SULT1E1P49888 294 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 SGSHP51688 502 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 C21orf59P57076 290 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 RACK1P63244 317 aaKnown RBP8.98□□□□□ -0.97
COPB1-210ENST00000533533 IL9RQ01113 521 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 INAVAQ3KP66 663 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 MPP7Q5T2T1 576 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 NUGGCQ68CJ6 796 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 ZNF776Q68DI1 518 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms