RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 TRIM24O15164 1050 aa18.23■□□□□ 0.51
SDC2-205ENST00000520233 NCAM2O15394 837 aa18.23■□□□□ 0.51
SDC2-205ENST00000520233 PECAM1P16284 738 aaPredicted RBP18.23■□□□□ 0.51
SDC2-205ENST00000520233 GALNT2Q10471 571 aa18.23■□□□□ 0.51
SDC2-205ENST00000520233 PLEKHG6Q3KR16 790 aa18.23■□□□□ 0.51
SDC2-205ENST00000520233 LRRC49Q8IUZ0 686 aa18.23■□□□□ 0.51
SDC2-205ENST00000520233 AHI1Q8N157 1196 aa18.23■□□□□ 0.51
SDC2-205ENST00000520233 OR7D4Q8NG98 312 aa18.23■□□□□ 0.51
SDC2-205ENST00000520233 HMCESQ96FZ2 354 aa18.23■□□□□ 0.51
SDC2-205ENST00000520233 WNT16Q9UBV4 365 aa18.23■□□□□ 0.51
SDC2-205ENST00000520233 TCF20Q9UGU0 1960 aaKnown RBP18.22■□□□□ 0.51
SDC2-205ENST00000520233 A0A0A0MRY4 1105 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 DFFAO00273 331 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 MX2P20592 715 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 ACVRL1P37023 503 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 GRIA2P42262 883 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 PAPOLAP51003 745 aaKnown RBP18.22■□□□□ 0.51
SDC2-205ENST00000520233 GALK1P51570 392 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 SERINC3Q13530 473 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 NOMO1Q15155 1222 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 MLF2Q15773 248 aaPredicted RBP18.22■□□□□ 0.51
SDC2-205ENST00000520233 GEN1Q17RS7 908 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 FUT11Q495W5 492 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 PITRM1Q5JRX3 1037 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 IER5LQ5T953 404 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 NAIF1Q69YI7 327 aaPredicted RBP18.22■□□□□ 0.51
SDC2-205ENST00000520233 NUDT18Q6ZVK8 323 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 TP53INP2Q8IXH6 220 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 APCDD1Q8J025 514 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 DCAF4L2Q8NA75 395 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 ACTL9Q8TC94 416 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 HAUS1Q96CS2 278 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 OLFM3Q96PB7 478 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 ACE2Q9BYF1 805 aaPredicted RBP18.22■□□□□ 0.51
SDC2-205ENST00000520233 ATP13A1Q9HD20 1204 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 SAE1Q9UBE0 346 aaPredicted RBP18.22■□□□□ 0.51
SDC2-205ENST00000520233 VPS28Q9UK41 221 aa18.22■□□□□ 0.51
SDC2-205ENST00000520233 INTS6Q9UL03 887 aaKnown RBP18.22■□□□□ 0.51
SDC2-205ENST00000520233 MYOFQ9NZM1 2061 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 MAN2B1O00754 1011 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 KDELR3O43731 214 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 URI1O94763 535 aaPredicted RBP18.21■□□□□ 0.51
SDC2-205ENST00000520233 KAT7O95251 611 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 APODP05090 189 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 GARSP41250 739 aaKnown RBP18.21■□□□□ 0.51
SDC2-205ENST00000520233 PAFAH1B1P43034 410 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 OTUD4Q01804 1114 aaKnown RBP18.21■□□□□ 0.51
SDC2-205ENST00000520233 PRKCQQ04759 706 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 KDSRQ06136 332 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 MESP2Q0VG99 397 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 XRCC4Q13426 336 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 TUBB2AQ13885 445 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 PDK1Q15118 436 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 SIX1Q15475 284 aaPredicted RBP18.21■□□□□ 0.51
SDC2-205ENST00000520233 IL31Q6EBC2 164 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 TXNDC11Q6PKC3 985 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 TPRG1Q6ZUI0 275 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 ADAT2Q7Z6V5 191 aaKnown RBP18.21■□□□□ 0.51
SDC2-205ENST00000520233 ADIPOR2Q86V24 386 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 TERB1Q8NA31 727 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 NETO2Q8NC67 525 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 ACDQ96AP0 544 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 CAPZA3Q96KX2 299 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 NECAB3Q96P71 396 aaPredicted RBP18.21■□□□□ 0.51
SDC2-205ENST00000520233 SPON2Q9BUD6 331 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 TUBB2BQ9BVA1 445 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 C2orf49Q9BVC5 232 aaPredicted RBP18.21■□□□□ 0.51
SDC2-205ENST00000520233 FRMD8P1Q9BZ68 369 aaPredicted RBP18.21■□□□□ 0.51
SDC2-205ENST00000520233 BRD8Q9H0E9 1235 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 SMARCAL1Q9NZC9 954 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 MUTYHQ9UIF7 546 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 MYO10Q9HD67 2058 aa18.21■□□□□ 0.51
SDC2-205ENST00000520233 CXorf51AA0A1B0GTR3 108 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 SHISA7A6NL88 538 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 PPP1R12AO14974 1030 aaPredicted RBP18.2■□□□□ 0.5
SDC2-205ENST00000520233 TIMM44O43615 452 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 MAP3K6O95382 1288 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 POLR2EP19388 210 aaKnown RBP18.2■□□□□ 0.5
SDC2-205ENST00000520233 SULT2A1Q06520 285 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 EIF4HQ15056 248 aaKnown RBP18.2■□□□□ 0.5
SDC2-205ENST00000520233 TMEM196Q5HYL7 178 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 TMEM215Q68D42 235 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 MBLAC2Q68D91 279 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 ZNF354CQ86Y25 554 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 ATPAF2Q8N5M1 289 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 FAM3CQ92520 227 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 TTC17Q96AE7 1141 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 HDAC11Q96DB2 347 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 TSGA13Q96PP4 275 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 FBRSL1Q9HCM7 1045 aaKnown RBP18.2■□□□□ 0.5
SDC2-205ENST00000520233 ARHGEF3Q9NR81 526 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 CDC23Q9UJX2 597 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 FBXL21Q9UKT6 434 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 CA14Q9ULX7 337 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 HPCAL4Q9UM19 191 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 R3HDM2Q9Y2K5 976 aaKnown RBP18.2■□□□□ 0.5
SDC2-205ENST00000520233 C5orf42Q9H799 3197 aa18.2■□□□□ 0.5
SDC2-205ENST00000520233 KIAA1549LQ6ZVL6 1849 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 TBC1D3BA6NDS4 549 aa18.19■□□□□ 0.5
SDC2-205ENST00000520233 HACD1B0YJ81 288 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms