RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ZNF804BA4D1E1 1349 aa4.1□□□□□ -1.75
TOPBP1-208ENST00000511439 MGAMO43451 1857 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 SCN9AQ15858 1988 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 A0A087WV62 115 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 OR2W5A6NFC9 320 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 TMEM221A6NGB7 291 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 LINC01548A6NM66 108 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 F5H423 210 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 M0R296 226 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 IFRD1O00458 451 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 FYB1O15117 783 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 SNX2O60749 519 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 TJP3O95049 919 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 PRKCBP05771 671 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 GKP32189 559 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 CYP2C18P33260 490 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 HTR7P34969 479 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 PDE1AP54750 535 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 STARD3Q14849 445 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 CYP1B1Q16678 543 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 LEXMQ3ZCV2 418 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 FAM83BQ5T0W9 1011 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 TMTC4Q5T4D3 741 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 ABLIM2Q6H8Q1 611 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 ZNF425Q6IV72 752 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 ANKRD16Q6P6B7 361 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 Q6ZWC4 215 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 PARS2Q7L3T8 475 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 RAB11FIP4Q86YS3 637 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 MYLK4Q86YV6 388 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 LRRC71Q8N4P6 559 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 METTL25Q8N6Q8 603 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 Q8N9P0 234 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 SEMA6DQ8NFY4 1073 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 MBD3L2Q8NHZ7 208 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 POF1BQ8WVV4 589 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 DPF1Q92782 380 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 CTHRC1Q96CG8 243 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 TRIM36Q9NQ86 728 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 DUSP22Q9NRW4 184 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 POLLQ9UGP5 575 aa4.09□□□□□ -1.75
TOPBP1-208ENST00000511439 ASPMQ8IZT6 3477 aa4.09□□□□□ -1.76
TOPBP1-208ENST00000511439 GVINP1Q7Z2Y8 2422 aa4.09□□□□□ -1.76
TOPBP1-208ENST00000511439 NAV2Q8IVL1 2488 aa4.09□□□□□ -1.76
TOPBP1-208ENST00000511439 WDR91A4D1P6 747 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 GOLGA6L3A6NEY3 463 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 CYSRT1A8MQ03 144 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 H0YIZ8 118 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 M0R3H8 397 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 PSMD9O00233 223 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 DNM1LO00429 736 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 FFAR2O15552 330 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 RNMTO43148 476 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 CCNT2O60583 730 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 PMPCBO75439 489 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 FAM163BP0C2L3 166 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 EBLN1P0CF75 366 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 IL9P15248 144 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 CD19P15391 556 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 PECAM1P16284 738 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 NDUFB7P17568 137 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 ITPKBP27987 946 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 RBL1P28749 1068 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 CCT8P50990 548 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 TPTEP56180 551 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 GPS1Q13098 491 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 PPIL2Q13356 520 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 EIF4A2Q14240 407 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 PSME4Q14997 1843 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 CLCA4Q14CN2 919 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 HLFQ16534 295 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 TRIM60Q495X7 471 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 HERC4Q5GLZ8 1057 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 MAP3K21Q5TCX8 1036 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 RIF1Q5UIP0 2472 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 ARL6IP4Q66PJ3 421 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 PGBD2Q6P3X8 592 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 MTHFD1LQ6UB35 978 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 CLEC9AQ6UXN8 241 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 PPP1R42Q7Z4L9 355 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 AMIGO2Q86SJ2 522 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 ERO1BQ86YB8 467 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 KIAA2013Q8IYS2 634 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 KMT2EQ8IZD2 1858 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 ZNF527Q8NB42 609 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 SUN3Q8TAQ9 357 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 MORC4Q8TE76 937 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 SH3TC1Q8TE82 1336 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 ABHD5Q8WTS1 349 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 MUL1Q969V5 352 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 PRR25Q96S07 402 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 WDR24Q96S15 920 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 DPCDQ9BVM2 203 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 RPAP1Q9BWH6 1393 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 FSD1LQ9BXM9 530 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 NKX1-2Q9UD57 310 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 STEAP1Q9UHE8 339 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 ST3GAL5Q9UNP4 418 aa4.08□□□□□ -1.76
TOPBP1-208ENST00000511439 SLC27A6Q9Y2P4 619 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms