RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SCAPQ12770 1279 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 KRT31Q15323 416 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 FAM102AQ5T9C2 384 aaPredicted RBP12.3□□□□□ -0.44
MED28-203ENST00000503945 KIAA0895LQ68EN5 471 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 DSG4Q86SJ6 1040 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 NOP9Q86U38 636 aaKnown RBP12.3□□□□□ -0.44
MED28-203ENST00000503945 SLCO6A1Q86UG4 719 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 CIR1Q86X95 450 aaPredicted RBP12.3□□□□□ -0.44
MED28-203ENST00000503945 ZNF677Q86XU0 584 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 STK40Q8N2I9 435 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 NT5C3BQ969T7 300 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 PGAP3Q96FM1 320 aaPredicted RBP12.3□□□□□ -0.44
MED28-203ENST00000503945 PCMTD1Q96MG8 357 aaPredicted RBP12.3□□□□□ -0.44
MED28-203ENST00000503945 MUC3BQ9H195 1237 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 PIGVQ9NUD9 493 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 ANO10Q9NW15 660 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 ARHGEF38Q9NXL2 777 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 SLC25A13Q9UJS0 675 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 VPS28Q9UK41 221 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 TBC1D30Q9Y2I9 924 aa12.3□□□□□ -0.44
MED28-203ENST00000503945 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
MED28-203ENST00000503945 KNL1Q8NG31 2342 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TBC1D3DA0A087WVF3 549 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TBC1D3IA0A087WXS9 549 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TBC1D3EA0A087X179 549 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TBC1D3KA0A087X1G2 549 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 A0A1W2PP55 124 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TBC1D3FA6NER0 549 aaPredicted RBP12.29□□□□□ -0.44
MED28-203ENST00000503945 TBC1D3LB9A6J9 549 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 F8VZ95 297 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 GOLGA8SH3BPF8 625 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 SRGAP2O75044 1071 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 GFPT2O94808 682 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 ADCY5O95622 1261 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 ADH1BP00325 375 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 MMEP08473 750 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TBC1D3HP0C7X1 549 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 FTH1P19P0C7X4 201 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 ZNF883P0CG24 379 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
MED28-203ENST00000503945 ELAVL3Q14576 367 aaKnown RBP12.29□□□□□ -0.44
MED28-203ENST00000503945 DLG2Q15700 870 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 KIF19Q2TAC6 998 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 C5orf22Q49AR2 442 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 FAM46CQ5VWP2 391 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TBC1D3GQ6DHY5 549 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TBC1D3CQ6IPX1 549 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 C19orf48Q6RUI8 117 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.29□□□□□ -0.44
MED28-203ENST00000503945 CCNI2Q6ZMN8 369 aaPredicted RBP12.29□□□□□ -0.44
MED28-203ENST00000503945 ADAT2Q7Z6V5 191 aaKnown RBP12.29□□□□□ -0.44
MED28-203ENST00000503945 C14orf80Q86SX3 495 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 PROSER1Q86XN7 944 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 XYLT1Q86Y38 959 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 NAXDQ8IW45 347 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TBC1D3Q8IZP1 549 aaPredicted RBP12.29□□□□□ -0.44
MED28-203ENST00000503945 OR2T34Q8NGX1 318 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 OR14C36Q8NHC7 312 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 GPT2Q8TD30 523 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 RHBDD1Q8TEB9 315 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 ADAMTS14Q8WXS8 1223 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 SPAG5Q96R06 1193 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 HAPLN3Q96S86 360 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 IL21RQ9HBE5 538 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TM9SF3Q9HD45 589 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 TM7SF3Q9NS93 570 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 FAM207AQ9NSI2 230 aaPredicted RBP12.29□□□□□ -0.44
MED28-203ENST00000503945 ADAMTS1Q9UHI8 967 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 FZD4Q9ULV1 537 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 ANKRD6Q9Y2G4 727 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 DAAM1Q9Y4D1 1078 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 ITIH6Q6UXX5 1313 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 NUMA1Q14980 2115 aa12.29□□□□□ -0.44
MED28-203ENST00000503945 A0A1W2PPC4 97 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 LRRC10BA6NIK2 292 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 DRGXA6NNA5 263 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 ATP9BO43861 1147 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 DFNA5O60443 496 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 CBFA2T3O75081 653 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 SOX5P35711 763 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 STAT1P42224 750 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 GRIA4P48058 902 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 PSMD8P48556 350 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 NUMBP49757 651 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 STK19P49842 368 aaPredicted RBP12.28□□□□□ -0.44
MED28-203ENST00000503945 C21orf59P57076 290 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 RACK1P63244 317 aaKnown RBP12.28□□□□□ -0.44
MED28-203ENST00000503945 CDR2Q01850 454 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 BNC1Q01954 994 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 CENPCQ03188 943 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 CCDC15Q0P6D6 951 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 C2CD6Q53TS8 623 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 CDKAL1Q5VV42 579 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 NAA35Q5VZE5 725 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 CXorf57Q6NSI4 855 aaKnown RBP12.28□□□□□ -0.44
MED28-203ENST00000503945 NCEH1Q6PIU2 408 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 RBM43Q6ZSC3 357 aaKnown RBP12.28□□□□□ -0.44
MED28-203ENST00000503945 ARCQ7LC44 396 aa12.28□□□□□ -0.44
MED28-203ENST00000503945 SETD3Q86TU7 594 aaPredicted RBP12.28□□□□□ -0.44
MED28-203ENST00000503945 OR8D1Q8WZ84 308 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms