RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 TCF15Q12870 199 aa20.07■□□□□ 0.8
SEC22A-209ENST00000491366 TXLNBQ8N3L3 684 aa20.07■□□□□ 0.8
SEC22A-209ENST00000491366 ATRIPQ8WXE1 791 aa20.07■□□□□ 0.8
SEC22A-209ENST00000491366 RPL10LQ96L21 214 aaKnown RBP20.07■□□□□ 0.8
SEC22A-209ENST00000491366 GABRG3Q99928 467 aa20.07■□□□□ 0.8
SEC22A-209ENST00000491366 RETREG1Q9H6L5 497 aa20.07■□□□□ 0.8
SEC22A-209ENST00000491366 PCDH18Q9HCL0 1135 aa20.07■□□□□ 0.8
SEC22A-209ENST00000491366 TCRBV21S2A2A0A5A6 115 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 PJA2O43164 708 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 SNAP91O60641 907 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 RAMP2O60895 175 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 PAPSS2O95340 614 aaPredicted RBP20.06■□□□□ 0.8
SEC22A-209ENST00000491366 EPHX1P07099 455 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 KRT7P08729 469 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 COMTP21964 271 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 SLC1A1P43005 524 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 DGKEP52429 567 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 CCZ1BP86790 482 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 CCZ1P86791 482 aaPredicted RBP20.06■□□□□ 0.8
SEC22A-209ENST00000491366 SULT2A1Q06520 285 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 DMWDQ09019 674 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 KIF5AQ12840 1032 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 STARD3Q14849 445 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 IL31Q6EBC2 164 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 ANO7Q6IWH7 933 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 KIAA1211LQ6NV74 962 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 ZNF783Q6ZMS7 281 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 ZNF354CQ86Y25 554 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 KCTD6Q8NC69 237 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 TPCN2Q8NHX9 752 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 MRGPRX3Q96LB0 322 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 PSMB7Q99436 277 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 C2orf49Q9BVC5 232 aaPredicted RBP20.06■□□□□ 0.8
SEC22A-209ENST00000491366 ATP13A1Q9HD20 1204 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 POLMQ9NP87 494 aaPredicted RBP20.06■□□□□ 0.8
SEC22A-209ENST00000491366 TRIM10Q9UDY6 481 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 SLC25A13Q9UJS0 675 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 ADGRG1Q9Y653 693 aa20.06■□□□□ 0.8
SEC22A-209ENST00000491366 A0A1W2PQF6 199 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 MACROD2A1Z1Q3 448 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 CBX4O00257 560 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 SYNCRIPO60506 623 aaKnown RBP20.05■□□□□ 0.8
SEC22A-209ENST00000491366 APBB3O95704 486 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 CD48P09326 243 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 TDGF1P13385 188 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 ERCC2P18074 760 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 GLDCP23378 1020 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 ACVRL1P37023 503 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 FNTBP49356 437 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 ZNF135P52742 658 aaPredicted RBP20.05■□□□□ 0.8
SEC22A-209ENST00000491366 POLNQ7Z5Q5 900 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 DAAM2Q86T65 1068 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 HMGB4Q8WW32 186 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 CALN1Q9BXU9 219 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 MTG2Q9H4K7 406 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 BCCIPQ9P287 314 aaKnown RBP eCLIP20.05■□□□□ 0.8
SEC22A-209ENST00000491366 VPS51Q9UID3 782 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 SLCO3A1Q9UIG8 710 aa20.05■□□□□ 0.8
SEC22A-209ENST00000491366 DOCK4Q8N1I0 1966 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 MUC22E2RYF6 1773 aaPredicted RBP20.04■□□□□ 0.8
SEC22A-209ENST00000491366 BTNL10A8MVZ5 291 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 WASH4PA8MWX3 477 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 TTC34A8MYJ7 566 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 SRPRAP08240 638 aaKnown RBP20.04■□□□□ 0.8
SEC22A-209ENST00000491366 AMPD1P23109 780 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 HCAR3P49019 387 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 PTPN5P54829 565 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 MMRN1Q13201 1228 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 ENPP2Q13822 863 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 DPYSQ14117 519 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 POLD3Q15054 466 aaPredicted RBP20.04■□□□□ 0.8
SEC22A-209ENST00000491366 C11orf63Q6NUN7 778 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 LINGO4Q6UY18 593 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 PGBD3Q8N328 593 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 CAMKK1Q8N5S9 505 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 DCAF4L2Q8NA75 395 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 ARHGEF2Q92974 986 aaKnown RBP20.04■□□□□ 0.8
SEC22A-209ENST00000491366 MYO19Q96H55 970 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 CELF6Q96J87 481 aaKnown RBP20.04■□□□□ 0.8
SEC22A-209ENST00000491366 CSPG4P5Q96PW8 444 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 MAGEH1Q9H213 219 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 KCNH6Q9H252 994 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 TMEM245Q9H330 911 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 NOL6Q9H6R4 1146 aaKnown RBP20.04■□□□□ 0.8
SEC22A-209ENST00000491366 ALG6Q9Y672 507 aa20.04■□□□□ 0.8
SEC22A-209ENST00000491366 ALDH1A2O94788 518 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 KRT1P04264 644 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 ETFBP38117 255 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 NNMTP40261 264 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 DPYSL3Q14195 570 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 ZNF528Q3MIS6 628 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 ACCSLQ4AC99 568 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 RHOT1Q8IXI2 618 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 NETO2Q8NC67 525 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 TSC1Q92574 1164 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 ATOH1Q92858 354 aaPredicted RBP20.03■□□□□ 0.8
SEC22A-209ENST00000491366 HMCESQ96FZ2 354 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 MFHAS1Q9Y4C4 1052 aa20.03■□□□□ 0.8
SEC22A-209ENST00000491366 CACNA1IQ9P0X4 2223 aa20.02■□□□□ 0.8
SEC22A-209ENST00000491366 LRRD1A4D1F6 860 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms