RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TAB2Q9NYJ8 693 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 COX16Q9P0S2 106 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 APEX2Q9UBZ4 518 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 SLCO3A1Q9UIG8 710 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 KLF15Q9UIH9 416 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 GGA2Q9UJY4 613 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 DOLKQ9UPQ8 538 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 FHOD1Q9Y613 1164 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 PCNX2A6NKB5 2137 aa7.58□□□□□ -1.2
PRPF4B-208ENST00000490653 TTC34A8MYJ7 566 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 KCNU1A8MYU2 1149 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 I6L893 689 aaPredicted RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 CAPN9O14815 690 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 EPHB6O15197 1021 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 IRAK2O43187 625 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 MED7O43513 233 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 LATS1O95835 1130 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 CFIP05156 583 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 PRKCSHP14314 528 aaPredicted RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 ENGP17813 658 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 TACR2P21452 398 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 ADH6P28332 368 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 MZF1P28698 734 aaPredicted RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 CD6P30203 668 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 ACSL1P33121 698 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 NOVA1P51513 510 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 TPMTP51580 245 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 RNASE9P60153 205 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 RPS14P62263 151 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 YWHAZP63104 245 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 BNC1Q01954 994 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 ZNF252P-AS1Q0IIN9 211 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 CAMK2GQ13555 558 aaPredicted RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 BYSLQ13895 437 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 KCNJ12Q14500 433 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 FNDC3BQ53EP0 1204 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 RAB6CQ53S08 254 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 ARTNQ5T4W7 220 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 KLHDC7AQ5VTJ3 777 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 OTUD1Q5VV17 481 aaPredicted RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 TAF3Q5VWG9 929 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 PEAR1Q5VY43 1037 aaPredicted RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 TRNP1Q6NT89 227 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 SLC23A3Q6PIS1 610 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 SLC36A4Q6YBV0 504 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 CLEC17AQ6ZS10 378 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 C11orf57Q6ZUT1 292 aaPredicted RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 ENOSF1Q7L5Y1 443 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 C11orf74Q86VG3 221 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 UNC45BQ8IWX7 931 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 FAM71AQ8IYT1 594 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 RGL4Q8IZJ4 473 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 DEFB124Q8NES8 71 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 FIBINQ8TAL6 211 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 UCMAQ8WVF2 138 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 DDX1Q92499 740 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 IGSF8Q969P0 613 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 AZIN2Q96A70 460 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 SIPA1Q96FS4 1042 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 PPP1R13BQ96KQ4 1090 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 RPL10LQ96L21 214 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 SLC2A13Q96QE2 648 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 PRMT1Q99873 361 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 SCNM1Q9BWG6 230 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 GTPBP2Q9BX10 602 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 NAA15Q9BXJ9 866 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 MAGEB5Q9BZ81 275 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 RAB6CQ9H0N0 254 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 TMEM9BQ9NQ34 198 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 USP36Q9P275 1121 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 KLK13Q9UKR3 277 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 SLC6A14Q9UN76 642 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 TLR6Q9Y2C9 796 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 SETXQ7Z333 2677 aaKnown RBP7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 CKAP5Q14008 2032 aa7.57□□□□□ -1.2
PRPF4B-208ENST00000490653 CACNA1EQ15878 2313 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 GTPBP10A4D1E9 387 aaKnown RBP7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 PES1O00541 588 aaKnown RBP7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 KCNK3O14649 394 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 ATXN7O15265 892 aaPredicted RBP7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 AP5Z1O43299 807 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 TIMM44O43615 452 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 HYAL3O43820 417 aaPredicted RBP7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 SYNCRIPO60506 623 aaKnown RBP7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 SIN3BO75182 1162 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 NDUFS2O75306 463 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 ZNF217O75362 1048 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 GJB6O95452 261 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 MMEP08473 750 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 VAV1P15498 845 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 CHRNB2P17787 502 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 POLR2EP19388 210 aaKnown RBP7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 ERCC5P28715 1186 aaPredicted RBP7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 CSKP41240 450 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 SLC11A2P49281 568 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 STK19P49842 368 aaPredicted RBP7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 STARD3Q14849 445 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 DUOXA1Q1HG43 343 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 TCP11X2Q5H9J9 407 aa7.56□□□□□ -1.2
PRPF4B-208ENST00000490653 DCAF12L1Q5VU92 463 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms