RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 SEMA5AQ13591 1074 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 KCNJ11Q14654 390 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 FAM153CQ494X1 144 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ANKRD20A2Q5SQ80 823 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 C6orf118Q5T5N4 469 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ZNF697Q5TEC3 545 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ANKRD20A1Q5TYW2 823 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ANKRD20A3Q5VUR7 823 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 IZUMO3Q5VZ72 239 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 RFWD3Q6PCD5 774 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 SYCE2Q6PIF2 218 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 POTEHQ6S545 545 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 PRUNE1Q86TP1 453 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 GSPT2Q8IYD1 628 aaKnown RBP13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ZCCHC9Q8N567 271 aaKnown RBP13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ATPAF2Q8N5M1 289 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 TEX26Q8N6G2 289 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 SH3RF2Q8TEC5 729 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 PRCCQ92733 491 aaPredicted RBP13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ZNF599Q96NL3 588 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 FRMD8Q9BZ67 464 aaPredicted RBP13.14□□□□□ -0.31
TOP3A-206ENST00000489131 EIF2B3Q9NR50 452 aaKnown RBP13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ZNF446Q9NWS9 450 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 OBP2AQ9NY56 170 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 GDE1Q9NZC3 331 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 FAM153AQ9UHL3 310 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 ANAPC5Q9UJX4 755 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 MRPS23Q9Y3D9 190 aaKnown RBP13.14□□□□□ -0.31
TOP3A-206ENST00000489131 SH3BP1Q9Y3L3 701 aa13.14□□□□□ -0.31
TOP3A-206ENST00000489131 LAMA3Q16787 3333 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 IRF1P10914 325 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 TPSB2P20231 275 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 OR1E1P30953 314 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 FDFT1P37268 417 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 PAPOLAP51003 745 aaKnown RBP13.13□□□□□ -0.31
TOP3A-206ENST00000489131 SGSHP51688 502 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 RPS24P62847 133 aaKnown RBP13.13□□□□□ -0.31
TOP3A-206ENST00000489131 IL10RBQ08334 325 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 SERINC3Q13530 473 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 HNRNPDQ14103 355 aaKnown RBP13.13□□□□□ -0.31
TOP3A-206ENST00000489131 TPSAB1Q15661 275 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 PARP6Q2NL67 630 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 ANO4Q32M45 955 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 MPPE1Q53F39 396 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 TEX44Q53QW1 395 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 CXorf57Q6NSI4 855 aaKnown RBP13.13□□□□□ -0.31
TOP3A-206ENST00000489131 TMC5Q6UXY8 1006 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 TMC3Q7Z5M5 1100 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 TFAP2DQ7Z6R9 452 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 BBS7Q8IWZ6 715 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 ZNF567Q8N184 647 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 CCNYQ8ND76 341 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 MCUQ8NE86 351 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 CCDC110Q8TBZ0 833 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 ARHGEF2Q92974 986 aaKnown RBP13.13□□□□□ -0.31
TOP3A-206ENST00000489131 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 CELF6Q96J87 481 aaKnown RBP13.13□□□□□ -0.31
TOP3A-206ENST00000489131 TEKT5Q96M29 485 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 PPP1R2P1Q96PQ5 205 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 FUT8Q9BYC5 575 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 ACE2Q9BYF1 805 aaPredicted RBP13.13□□□□□ -0.31
TOP3A-206ENST00000489131 VIPAS39Q9H9C1 493 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 PIDD1Q9HB75 910 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 PDFQ9HBH1 243 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 TBC1D14Q9P2M4 693 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 CCL26Q9Y258 94 aa13.13□□□□□ -0.31
TOP3A-206ENST00000489131 DENND4AQ7Z401 1863 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 TYW5A2RUC4 315 aaKnown RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 ERI2A8K979 691 aaKnown RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 E7ESA3 106 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 EIF3HO15372 352 aaKnown RBP eCLIP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 PRAMEF11O60813 436 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 LUC7L3O95232 432 aaKnown RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 PRAMEF12O95522 483 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 PENKP01210 267 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 CCNB1P14635 433 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 FSHRP23945 695 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 HOXD9P28356 352 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 VPS41P49754 854 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 NRLP54845 237 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 GNA12Q03113 381 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 ZBTB17Q13105 803 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 ZNF177Q13360 481 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 SLMAPQ14BN4 828 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 POLD3Q15054 466 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 TMCO4Q5TGY1 634 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 ARHGEF18Q6ZSZ5 1173 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 ARID3BQ8IVW6 561 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 NPAS3Q8IXF0 933 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 CELF5Q8N6W0 485 aaKnown RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 C12orf76Q8N812 135 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 TDRD5Q8NAT2 981 aaKnown RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 RIN3Q8TB24 985 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 ITFG1Q8TB96 612 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 TMA16Q96EY4 203 aaKnown RBP13.12□□□□□ -0.31
TOP3A-206ENST00000489131 HMCESQ96FZ2 354 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 ZSWIM3Q96MP5 696 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 GBA3Q9H227 469 aa13.12□□□□□ -0.31
TOP3A-206ENST00000489131 S1PR5Q9H228 398 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms