RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 OASLQ15646 514 aaKnown RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 PLEKHG6Q3KR16 790 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 NAIF1Q69YI7 327 aaPredicted RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 RALGPS2Q86X27 583 aaPredicted RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 RNF135Q8IUD6 432 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 APCDD1Q8J025 514 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 ZNF687Q8N1G0 1237 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 CARNMT1Q8N4J0 409 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 C12orf50Q8NA57 414 aaPredicted RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 TTC13Q8NBP0 860 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 ACTL9Q8TC94 416 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 MAIP1Q8WWC4 291 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 NKD2Q969F2 451 aaPredicted RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 HDAC11Q96DB2 347 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 HMCESQ96FZ2 354 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 NAP1L3Q99457 506 aaPredicted RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 FRMD8P1Q9BZ68 369 aaPredicted RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 C8orf33Q9H7E9 229 aaPredicted RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 L2HGDHQ9H9P8 463 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 PDFQ9HBH1 243 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 FBRSL1Q9HCM7 1045 aaKnown RBP16.22■□□□□ 0.19
APOE-205ENST00000485628 SORCS3Q9UPU3 1222 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 TRIOO75962 3097 aa16.22■□□□□ 0.19
APOE-205ENST00000485628 KDELR3O43731 214 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 RAMP2O60895 175 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 RHOCP08134 193 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 ACVRL1P37023 503 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 CSKP41240 450 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 PAPOLAP51003 745 aaKnown RBP16.21■□□□□ 0.19
APOE-205ENST00000485628 DYNLT1P63172 113 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 OTUD4Q01804 1114 aaKnown RBP16.21■□□□□ 0.19
APOE-205ENST00000485628 PPIDQ08752 370 aaKnown RBP16.21■□□□□ 0.19
APOE-205ENST00000485628 CDH18Q13634 790 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 DMC1Q14565 340 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 POLD3Q15054 466 aaPredicted RBP16.21■□□□□ 0.19
APOE-205ENST00000485628 PRKD1Q15139 912 aaPredicted RBP16.21■□□□□ 0.19
APOE-205ENST00000485628 CCNG2Q16589 344 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 LONRF2Q1L5Z9 754 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 C1orf228Q6PIY5 440 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 TXNDC11Q6PKC3 985 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 BZW1Q7L1Q6 419 aaKnown RBP16.21■□□□□ 0.19
APOE-205ENST00000485628 NAT16Q8N8M0 369 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 NETO2Q8NC67 525 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 OR7D4Q8NG98 312 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.21■□□□□ 0.19
APOE-205ENST00000485628 P3H4Q92791 437 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 MSANTD3Q96H12 275 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 CELF6Q96J87 481 aaKnown RBP16.21■□□□□ 0.19
APOE-205ENST00000485628 BRD8Q9H0E9 1235 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 USP29Q9HBJ7 922 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 ABCB8Q9NUT2 735 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 DNAJC17Q9NVM6 304 aaKnown RBP16.21■□□□□ 0.19
APOE-205ENST00000485628 HCN2Q9UL51 889 aa16.21■□□□□ 0.19
APOE-205ENST00000485628 VCANP13611 3396 aa16.21■□□□□ 0.18
APOE-205ENST00000485628 NCOR1O75376 2440 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 HACD1B0YJ81 288 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 SPECC1L-ADORA2AF8WAN1 911 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 LIASO43766 372 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 PRAMEF11O60813 436 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 URI1O94763 535 aaPredicted RBP16.2■□□□□ 0.18
APOE-205ENST00000485628 PABPC1P11940 636 aaKnown RBP16.2■□□□□ 0.18
APOE-205ENST00000485628 CCNCP24863 283 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 ETFBP38117 255 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 SOX9P48436 509 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 DGKGP49619 791 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 GALK1P51570 392 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 GEN1Q17RS7 908 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 WHAMMP3Q1A5X7 153 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 FUT11Q495W5 492 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 SLC44A4Q53GD3 710 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 PITRM1Q5JRX3 1037 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 RNF219Q5W0B1 726 aaPredicted RBP16.2■□□□□ 0.18
APOE-205ENST00000485628 ARHGAP36Q6ZRI8 547 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 SUGP1Q8IWZ8 645 aaKnown RBP16.2■□□□□ 0.18
APOE-205ENST00000485628 TERB1Q8NA31 727 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 DCAF4L2Q8NA75 395 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 CSGALNACT1Q8TDX6 532 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 MAML1Q92585 1016 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 ZNF592Q92610 1267 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 EZH1Q92800 747 aaPredicted RBP16.2■□□□□ 0.18
APOE-205ENST00000485628 HEBP1Q9NRV9 189 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 DEC1Q9P2X7 70 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 WNT16Q9UBV4 365 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 GGA2Q9UJY4 613 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 DRG1Q9Y295 367 aaKnown RBP16.2■□□□□ 0.18
APOE-205ENST00000485628 STARD13Q9Y3M8 1113 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 HEY1Q9Y5J3 304 aa16.2■□□□□ 0.18
APOE-205ENST00000485628 MUC22E2RYF6 1773 aaPredicted RBP16.2■□□□□ 0.18
APOE-205ENST00000485628 MYO18AQ92614 2054 aaKnown RBP16.19■□□□□ 0.18
APOE-205ENST00000485628 BCLAF3A2AJT9 711 aaKnown RBP16.19■□□□□ 0.18
APOE-205ENST00000485628 ARHGAP42A6NI28 874 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 PRRT4C9JH25 899 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 MX2P20592 715 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 ARF5P84085 180 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 PDK1Q15118 436 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 TMEM196Q5HYL7 178 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 ADAT2Q7Z6V5 191 aaKnown RBP16.19■□□□□ 0.18
APOE-205ENST00000485628 GJD3Q8N144 294 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 AHI1Q8N157 1196 aa16.19■□□□□ 0.18
APOE-205ENST00000485628 TTC8Q8TAM2 541 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms