RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TBC1D25Q3MII6 688 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 POM121L1PQ3SYA9 428 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 ACCSLQ4AC99 568 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 TAF1BQ53T94 588 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-206ENST00000483030 ZC3H12AQ5D1E8 599 aaKnown RBP7.62□□□□□ -1.19
CSDE1-206ENST00000483030 RAP1GAP2Q684P5 730 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 KRBA2Q6ZNG9 492 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 CHSY1Q86X52 802 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 FAM149B1Q96BN6 582 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 KLHDC7BQ96G42 594 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 HSFY1Q96LI6 401 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 SPATA32Q96LK8 384 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 SERPINB11Q96P15 392 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 LGMNQ99538 433 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 ST7Q9NRC1 585 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 CYTH4Q9UIA0 394 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 SARDHQ9UL12 918 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 PCDHB1Q9Y5F3 818 aa7.62□□□□□ -1.19
CSDE1-206ENST00000483030 FAM237AA0A1B0GTK4 181 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 PRAMEF26H0Y7S4 382 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 J3QKU1 62 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 SLC31A1O15431 190 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 PLRG1O43660 514 aaKnown RBP7.61□□□□□ -1.19
CSDE1-206ENST00000483030 APOEP02649 317 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 MPOP05164 745 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 MYF5P13349 255 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 TACR2P21452 398 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 DGKAP23743 735 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 NUDT1P36639 197 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 PRCPP42785 496 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 DAB2P98082 770 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 FKBP3Q00688 224 aaKnown RBP7.61□□□□□ -1.19
CSDE1-206ENST00000483030 CNTN1Q12860 1018 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 NNTQ13423 1086 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 FAM46CQ5VWP2 391 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 SYPL2Q5VXT5 272 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 ANKRD40Q6AI12 368 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 TMC6Q7Z403 805 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 DSG4Q86SJ6 1040 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 TAC4Q86UU9 113 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 IQCHQ86VS3 1027 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 CCAR2Q8N163 923 aaKnown RBP7.61□□□□□ -1.19
CSDE1-206ENST00000483030 ZNF248Q8NDW4 579 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 FRS2Q8WU20 508 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 KLK6Q92876 244 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 KAT5Q92993 513 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 SNX21Q969T3 373 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 SLC35C1Q96A29 364 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 NT5C1BQ96P26 610 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 SPAG5Q96R06 1193 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 MYOCQ99972 504 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 OSBPL2Q9H1P3 480 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 CAAP1Q9H8G2 361 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 CPNE5Q9HCH3 593 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 UCKL1Q9NWZ5 548 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 TJP2Q9UDY2 1190 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 ARMCX3Q9UH62 379 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-206ENST00000483030 DMTF1Q9Y222 760 aa7.61□□□□□ -1.19
CSDE1-206ENST00000483030 ZNF462Q96JM2 2506 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 ASH1LQ9NR48 2969 aaKnown RBP7.6□□□□□ -1.19
CSDE1-206ENST00000483030 TMEM131Q92545 1883 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 PTPRQQ9UMZ3 2332 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 CAPN8A6NHC0 703 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 F5H5T6 163 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 ERVH48-1M5A8F1 160 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 MCF2LO15068 1137 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 SLC16A3O15427 465 aaKnown RBP7.6□□□□□ -1.19
CSDE1-206ENST00000483030 FFAR2O15552 330 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 SLC7A4O43246 635 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 BNIP3LO60238 219 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 OPA1O60313 960 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 ZNF202O95125 648 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 TRUB2O95900 331 aaKnown RBP7.6□□□□□ -1.19
CSDE1-206ENST00000483030 THEGLP0DJG4 465 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 PRLRP16471 622 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 ZNF18P17022 549 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 GPD2P43304 727 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 PLK1P53350 603 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 PMS1P54277 932 aaKnown RBP7.6□□□□□ -1.19
CSDE1-206ENST00000483030 KRT85P78386 507 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 SULT2A1Q06520 285 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 SLC12A1Q13621 1099 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 STILQ15468 1287 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 DLG2Q15700 870 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 SETMARQ53H47 684 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-206ENST00000483030 HS1BP3Q53T59 392 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 ARHGAP40Q5TG30 622 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 AGBL4Q5VU57 503 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 BROXQ5VW32 411 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 RRAGAQ7L523 313 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 TRIM69Q86WT6 500 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 CIR1Q86X95 450 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-206ENST00000483030 HSCBQ8IWL3 235 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 PPM1KQ8N3J5 372 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 OR4C6Q8NH72 309 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 OR8D1Q8WZ84 308 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 FAM131CQ96AQ9 280 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 HIC2Q96JB3 615 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 BTN2A3PQ96KV6 586 aa7.6□□□□□ -1.19
CSDE1-206ENST00000483030 ZNF578Q96N58 590 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms