RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 C1QTNF3-AMACRE9PGA6 284 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 F8VZ95 297 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 ZZEF1O43149 2961 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 PAGE1O75459 146 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 GRAP2O75791 330 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 RNASEH2AO75792 299 aaKnown RBP12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 KRT37O76014 449 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 TPM2P07951 284 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 CTSOP43234 321 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 CTSKP43235 329 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 GRK6P43250 576 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 ADPRHP54922 357 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 FAM193AP78312 1265 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 KRT83P78385 493 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 KCNMA1Q12791 1236 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 NME3Q13232 169 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 KIF19Q2TAC6 998 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 SLC25A52Q3SY17 297 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 ERICH1Q86X53 443 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 ENOX1Q8TC92 643 aaKnown RBP12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 FRS2Q8WU20 508 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 ALG14Q96F25 216 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 RPL10LQ96L21 214 aaKnown RBP12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 C1orf74Q96LT6 269 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 CCDC114Q96M63 670 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 FEM1AQ9BSK4 669 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 C2orf49Q9BVC5 232 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 NEUROG2Q9H2A3 272 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 RETREG1Q9H6L5 497 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 COX16Q9P0S2 106 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 SERGEFQ9UGK8 458 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 VANGL2Q9ULK5 521 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 HS3ST2Q9Y278 367 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 FHOD1Q9Y613 1164 aa12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 ANKRD11Q6UB99 2663 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-207ENST00000481335 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 LATO43561 262 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 DKK1O94907 266 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 IL1BP01584 269 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 SPINK2P20155 84 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 PSMD8P48556 350 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 STK19P49842 368 aaPredicted RBP12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 CLCN6P51797 869 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 C21orf59P57076 290 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 CENPCQ03188 943 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 DEUP1Q05D60 604 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 CCDC15Q0P6D6 951 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 OVGP1Q12889 678 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 SLC45A4Q5BKX6 768 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 FAM102AQ5T9C2 384 aaPredicted RBP12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 OTUD1Q5VV17 481 aaPredicted RBP12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 LRRC31Q6UY01 552 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 ZNF783Q6ZMS7 281 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 BNIPLQ7Z465 357 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 CIR1Q86X95 450 aaPredicted RBP12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 XYLT1Q86Y38 959 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 STK40Q8N2I9 435 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 OXR1Q8N573 874 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 SH2D3CQ8N5H7 860 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 AADATQ8N5Z0 425 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 DCAF4L2Q8NA75 395 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 EPS8L1Q8TE68 723 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 SETD7Q8WTS6 366 aaKnown RBP12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 CAMK1GQ96NX5 476 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 HAPLN3Q96S86 360 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 TKTL2Q9H0I9 626 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 MTG2Q9H4K7 406 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 IL21RQ9HBE5 538 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 PIGVQ9NUD9 493 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 VPS28Q9UK41 221 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 KLK13Q9UKR3 277 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 DMTF1Q9Y222 760 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 OR51B4Q9Y5P0 310 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 SNX11Q9Y5W9 270 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 DMXL2Q8TDJ6 3036 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 PKD1L2Q7Z442 2459 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 PLXNB3Q9ULL4 1909 aa12.47□□□□□ -0.41
SQSTM1-207ENST00000481335 ACACAQ13085 2346 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 IGLV3-10A0A075B6K4 115 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 MCF2LO15068 1137 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 PLRG1O43660 514 aaKnown RBP12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 MAGEC1O60732 1142 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 TOP3BO95985 862 aaKnown RBP12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 PNMA6AP0CW24 399 aaPredicted RBP12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 CD38P28907 300 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 DRD3P35462 400 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 ANP32AP39687 249 aaKnown RBP12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 SULT1E1P49888 294 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 NOMO3P69849 1222 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 C6orf118Q5T5N4 469 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 RBM43Q6ZSC3 357 aaKnown RBP12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 IQCHQ86VS3 1027 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 TRIM69Q86WT6 500 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 ZNF683Q8IZ20 524 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 OR14C36Q8NHC7 312 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 RHBDD1Q8TEB9 315 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 MUC3BQ9H195 1237 aa12.46□□□□□ -0.41
SQSTM1-207ENST00000481335 SAMSN1Q9NSI8 373 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms