RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MFSD11O43934 449 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 PLA2G6O60733 806 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 METTL18O95568 372 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 HSPA1AP0DMV8 641 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 HSPA1BP0DMV9 641 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 NOS2P35228 1153 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 HADHBP55084 474 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 SP2Q02086 613 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 CCDC85BQ15834 202 aaPredicted RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 PFKFB4Q16877 469 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 RNF219Q5W0B1 726 aaPredicted RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 LDB1Q86U70 411 aaPredicted RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 MICU2Q8IYU8 434 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 DCBLD1Q8N8Z6 715 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 B3GALNT2Q8NCR0 500 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 B4GALNT2Q8NHY0 566 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 COG4Q9H9E3 785 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 CYLDQ9NQC7 956 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 PAIP2BQ9ULR5 123 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 TTLL13PA6NNM8 815 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 CXorf49A8MYA2 514 aaPredicted RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 PDHXO00330 501 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 PEX11AO75192 247 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 NPM3O75607 178 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 MTA2O94776 668 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 CELF2O95319 508 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 RTP1P59025 263 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 PPIDQ08752 370 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 DMC1Q14565 340 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 PDK3Q15120 406 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 ZDHHC14Q8IZN3 488 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 PCDH19Q8TAB3 1148 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 RNF145Q96MT1 663 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 TRIM62Q9BVG3 475 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 BRD8Q9H0E9 1235 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 DPEP3Q9H4B8 488 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 ST6GALNAC4Q9H4F1 302 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 EXOSC4Q9NPD3 245 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 SEMA4BQ9NPR2 832 aaPredicted RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 ARHGEF3Q9NR81 526 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 TBC1D23Q9NUY8 699 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 ETAA1Q9NY74 926 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 MPP6Q9NZW5 540 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 LGALS13Q9UHV8 139 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 SYNPO2Q9UMS6 1093 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 PCDHA11Q9Y5I1 949 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 RGPD1P0DJD0 1748 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 KLRG2A4D1S0 409 aaPredicted RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 M0R3G1 203 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 CITO14578 2027 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 TBX10O75333 385 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 LRPAP1P30533 357 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 OLIG2Q13516 323 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 CYP51A1Q16850 503 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 ZIK1Q3SY52 487 aaPredicted RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 SPANXN3Q5MJ09 141 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 C11orf74Q86VG3 221 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 TMEM130Q8N3G9 435 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 MPP5Q8N3R9 675 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 DNAJB14Q8TBM8 379 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 ZNF398Q8TD17 642 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 GPR152Q8TDT2 470 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 ACOX2Q99424 681 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 PARK7Q99497 189 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 TBCDQ9BTW9 1192 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 PAIP1Q9H074 479 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 TMEM216Q9P0N5 145 aa9.23□□□□□ -0.93
HPS4-208ENST00000464362 ATXN2Q99700 1313 aaKnown RBP9.23□□□□□ -0.93
HPS4-208ENST00000464362 ARFGEF2Q9Y6D5 1785 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 PTGES3LE9PB15 166 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 TK2O00142 265 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 PSMD12O00232 456 aaPredicted RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 HDAC3O15379 428 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 CLOCKO15516 846 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 CILPO75339 1184 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 SOAT2O75908 522 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 GLP2RO95838 553 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 MT-ND1P03886 318 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 NPR3P17342 541 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 TRAF2Q12933 501 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 RALGDSQ12967 914 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 ATP6AP1LQ52LC2 224 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 MFSD14CQ5VZR4 134 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 MILR1Q7Z6M3 343 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 DHFR2Q86XF0 187 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 RIOX2Q8IUF8 465 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 MFN1Q8IWA4 741 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 CCDC185Q8N715 623 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 ANKRD52Q8NB46 1076 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 ZNF555Q8NEP9 628 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 BORCS6Q96GS4 357 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 FAM210AQ96ND0 272 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 KLHL5Q96PQ7 755 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 ZNF670Q9BS34 389 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 CINPQ9BW66 212 aaPredicted RBP9.22□□□□□ -0.93
HPS4-208ENST00000464362 TRIM54Q9BYV2 358 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 GPR88Q9GZN0 384 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 WWOXQ9NZC7 414 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 BTRCQ9Y297 605 aa9.22□□□□□ -0.93
HPS4-208ENST00000464362 NFASCO94856 1347 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms