RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CBX8Q9HC52 389 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 NCOR2Q9Y618 2525 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 SPTBN2O15020 2390 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 NYNRINQ9P2P1 1898 aaKnown RBP16.55■□□□□ 0.24
COL7A1-203ENST00000459756 CNOT1A5YKK6 2376 aaKnown RBP16.55■□□□□ 0.24
COL7A1-203ENST00000459756 A0A1B0GTW7 788 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 ANKRD62A6NC57 917 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 SIGLEC16A6NMB1 481 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 ATP9BO43861 1147 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 SRGAP2O75044 1071 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 RHOCP08134 193 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 SYPP08247 313 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 MAOBP27338 520 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 RFC1P35251 1148 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-203ENST00000459756 ADRA1BP35368 520 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 MAPK8P45983 427 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 NUMBP49757 651 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 ATXN3P54252 364 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-203ENST00000459756 KRT83P78385 493 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 ZSCAN23Q3MJ62 389 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 C6orf118Q5T5N4 469 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 ACAD10Q6JQN1 1059 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 DNAJC24Q6P3W2 148 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 ZNF783Q6ZMS7 281 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 MMAAQ8IVH4 418 aaKnown RBP16.55■□□□□ 0.24
COL7A1-203ENST00000459756 STK40Q8N2I9 435 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 GANCQ8TET4 914 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 FRS2Q8WU20 508 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 NAP1L5Q96NT1 182 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-203ENST00000459756 FAM129BQ96TA1 746 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 SYT11Q9BT88 431 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 C2orf49Q9BVC5 232 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-203ENST00000459756 EDEM3Q9BZQ6 932 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 ZYG11BQ9C0D3 744 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 C6orf106Q9H6K1 298 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-203ENST00000459756 FBXL12Q9NXK8 326 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 MPP6Q9NZW5 540 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 PPARGC1AQ9UBK2 798 aaKnown RBP16.55■□□□□ 0.24
COL7A1-203ENST00000459756 DOCK4Q8N1I0 1966 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 PCDH15Q96QU1 1955 aa16.55■□□□□ 0.24
COL7A1-203ENST00000459756 LRRC53A6NM62 1247 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 ARHGAP33O14559 1287 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 MID1O15344 667 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 GJB6O95452 261 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 ADH1BP00325 375 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 TNFAIP3P21580 790 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 GPD1P21695 349 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 C5AR1P21730 350 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 OR1E1P30953 314 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 SLC8A1P32418 973 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 NRG1Q02297 640 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-203ENST00000459756 NR1I3Q14994 352 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 ASIC2Q16515 512 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 ACCSLQ4AC99 568 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 ARTNQ5T4W7 220 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 SH3PXD2AQ5TCZ1 1133 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 TFAP2DQ7Z6R9 452 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 DSG4Q86SJ6 1040 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 LUZP1Q86V48 1076 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 FAM172AQ8WUF8 416 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 OMDQ99983 421 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 GTPBP2Q9BX10 602 aaKnown RBP16.54■□□□□ 0.24
COL7A1-203ENST00000459756 MIR1-1HGQ9H1L0 117 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 OSBPL2Q9H1P3 480 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 RETREG1Q9H6L5 497 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 AIPL1Q9NZN9 384 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 OR12D3Q9UGF7 316 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 FZD4Q9ULV1 537 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 HS3ST2Q9Y278 367 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-203ENST00000459756 NUMA1Q14980 2115 aa16.54■□□□□ 0.24
COL7A1-203ENST00000459756 CACNA1EQ15878 2313 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 ADAMTS9Q9P2N4 1935 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 TCRBV5S1A1TA0A578 114 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 ILVBLA1L0T0 632 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 BCAT2O15382 392 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-203ENST00000459756 RNASEH2AO75792 299 aaKnown RBP16.53■□□□□ 0.24
COL7A1-203ENST00000459756 VAV1P15498 845 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 PSMD8P48556 350 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 HDAC4P56524 1084 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 DLG2Q15700 870 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 UAP1L1Q3KQV9 507 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 RAB6CQ53S08 254 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 SFMBT2Q5VUG0 894 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 WDR59Q6PJI9 974 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 MCOLN2Q8IZK6 566 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 ZCCHC9Q8N567 271 aaKnown RBP16.53■□□□□ 0.24
COL7A1-203ENST00000459756 SH2D3CQ8N5H7 860 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 DCAF4L2Q8NA75 395 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 SNX19Q92543 992 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 NTAN1Q96AB6 310 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 VCPIP1Q96JH7 1222 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 PSMB7Q99436 277 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 ZDHHC5Q9C0B5 715 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 RAB6CQ9H0N0 254 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 FSCN3Q9NQT6 498 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 ZNF212Q9UDV6 495 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 ADAMTS1Q9UHI8 967 aa16.53■□□□□ 0.24
COL7A1-203ENST00000459756 EIF2B4Q9UI10 523 aaKnown RBP16.53■□□□□ 0.24
COL7A1-203ENST00000459756 VPS51Q9UID3 782 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms