RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CA12O43570 354 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 BCAS2O75934 225 aaPredicted RBP12.15□□□□□ -0.46
LTBR-203ENST00000441074 ENDOD1O94919 500 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 BMP10O95393 424 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 TRUB2O95900 331 aaKnown RBP12.15□□□□□ -0.46
LTBR-203ENST00000441074 SMPD1P17405 629 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 FUT4P22083 530 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 GLDCP23378 1020 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 MIPP30301 263 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 MS4A2Q01362 244 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
LTBR-203ENST00000441074 TFDP2Q14188 446 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 TAF5Q15542 800 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 INSCQ1MX18 579 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 MGAT5BQ3V5L5 792 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 CCDC92Q53HC0 331 aaPredicted RBP12.15□□□□□ -0.46
LTBR-203ENST00000441074 FAM160B1Q5W0V3 765 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 RWDD4Q6NW29 188 aaKnown RBP12.15□□□□□ -0.46
LTBR-203ENST00000441074 CARM1Q86X55 608 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 BHLHE22Q8NFJ8 381 aaPredicted RBP12.15□□□□□ -0.46
LTBR-203ENST00000441074 ZNF597Q96LX8 424 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 OSBPL11Q9BXB4 747 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 KATNBL1Q9H079 304 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 CDH19Q9H159 772 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 NRBP2Q9NSY0 501 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 TBC1D23Q9NUY8 699 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 MOCS1Q9NZB8 636 aa12.15□□□□□ -0.46
LTBR-203ENST00000441074 ARHGEF37A1IGU5 675 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 ASB14A6NK59 587 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 KCNN4O15554 427 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 KLHL41O60662 606 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 ALDOAP04075 364 aaKnown RBP12.14□□□□□ -0.47
LTBR-203ENST00000441074 PRKCGP05129 697 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 C8BP07358 591 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 APRTP07741 180 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 PIK3R1P27986 724 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 PPARGP37231 505 aaPredicted RBP12.14□□□□□ -0.47
LTBR-203ENST00000441074 ZBTB33Q86T24 672 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 RNF149Q8NC42 400 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 HM13Q8TCT9 377 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 PDCD6IPQ8WUM4 868 aaKnown RBP12.14□□□□□ -0.47
LTBR-203ENST00000441074 CNDP1Q96KN2 507 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 ZNF512Q96ME7 567 aaPredicted RBP12.14□□□□□ -0.47
LTBR-203ENST00000441074 FERMT1Q9BQL6 677 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 COPG2Q9UBF2 871 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 MORF4L1Q9UBU8 362 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 PCDHB12Q9Y5F1 795 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 C7orf72A4D263 438 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 TMEM247A6NEH6 219 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 XPO1O14980 1071 aaKnown RBP12.14□□□□□ -0.47
LTBR-203ENST00000441074 ZNF12P17014 697 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 ME2P23368 584 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 NDST2P52849 883 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 LAMTOR4Q0VGL1 99 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 MMRN1Q13201 1228 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 TRPC3Q13507 836 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 CEACAM7Q14002 265 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 GRB14Q14449 540 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 PPP2R5DQ14738 602 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 TGFBIQ15582 683 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 DUOXA2Q1HG44 320 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 PTPN20Q4JDL3 420 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 SLC9B1Q4ZJI4 515 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 PLEKHH3Q7Z736 793 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 SNX32Q86XE0 403 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 SLC4A11Q8NBS3 891 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 RP9Q8TA86 221 aaKnown RBP12.14□□□□□ -0.47
LTBR-203ENST00000441074 ABHD8Q96I13 439 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 MPHOSPH6Q99547 160 aaKnown RBP12.14□□□□□ -0.47
LTBR-203ENST00000441074 HNRNPABQ99729 332 aaKnown RBP12.14□□□□□ -0.47
LTBR-203ENST00000441074 MINDY3Q9H8M7 445 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 PNPLA3Q9NST1 481 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 CDH7Q9ULB5 785 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 USP18Q9UMW8 372 aa12.14□□□□□ -0.47
LTBR-203ENST00000441074 TPP1O14773 563 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 B4GALT5O43286 388 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 MAFO75444 373 aaPredicted RBP12.13□□□□□ -0.47
LTBR-203ENST00000441074 RNASEH2AO75792 299 aaKnown RBP12.13□□□□□ -0.47
LTBR-203ENST00000441074 LGALS2P05162 132 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 IQCF3P0C7M6 154 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 INSRRP14616 1297 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 CYP2B6P20813 491 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 PROZP22891 400 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 EPHA3P29320 983 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 HMOX2P30519 316 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 EFNA5P52803 228 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 MYL6P60660 151 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 PSMC1P62191 440 aaKnown RBP12.13□□□□□ -0.47
LTBR-203ENST00000441074 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 SETD3Q86TU7 594 aaPredicted RBP12.13□□□□□ -0.47
LTBR-203ENST00000441074 PGAM4Q8N0Y7 254 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 TFAP2BQ92481 460 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 BORCS5Q969J3 196 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 EME1Q96AY2 570 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 RMND5BQ96G75 393 aaPredicted RBP12.13□□□□□ -0.47
LTBR-203ENST00000441074 CORO1BQ9BR76 489 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 TINF2Q9BSI4 451 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 MRPL4Q9BYD3 311 aaKnown RBP12.13□□□□□ -0.47
LTBR-203ENST00000441074 MTMR12Q9C0I1 747 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms