RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ADRA1DP25100 572 aa26.27■■□□□ 1.8
CPNE1-216ENST00000437340 ITGB8P26012 769 aa26.27■■□□□ 1.8
CPNE1-216ENST00000437340 ETV4P43268 484 aa26.27■■□□□ 1.8
CPNE1-216ENST00000437340 ARPP19P56211 112 aa26.27■■□□□ 1.8
CPNE1-216ENST00000437340 CRADDP78560 199 aa26.27■■□□□ 1.8
CPNE1-216ENST00000437340 ACBD5Q5T8D3 534 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-216ENST00000437340 TIGD7Q6NT04 549 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-216ENST00000437340 STKLD1Q8NE28 680 aa26.27■■□□□ 1.8
CPNE1-216ENST00000437340 PPP1R2P1Q96PQ5 205 aa26.27■■□□□ 1.8
CPNE1-216ENST00000437340 PRDM5Q9NQX1 630 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-216ENST00000437340 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.27■■□□□ 1.8
CPNE1-216ENST00000437340 HCSTQ9UBK5 93 aa26.27■■□□□ 1.8
CPNE1-216ENST00000437340 VANGL2Q9ULK5 521 aa26.27■■□□□ 1.8
CPNE1-216ENST00000437340 FNDC1Q4ZHG4 1894 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-216ENST00000437340 MAGEB16A2A368 324 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 TRIM43BA6NCK2 446 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 COPEO14579 308 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 MATN3O15232 486 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 UGT1A9O60656 530 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 MAFKO60675 156 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 RFPL1O75677 317 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 MOCS2O96007 188 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-216ENST00000437340 CCNB1P14635 433 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 NPY2RP49146 381 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 RPL10AP62906 217 aaKnown RBP26.26■■□□□ 1.79
CPNE1-216ENST00000437340 MGAT5BQ3V5L5 792 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 RSPO2Q6UXX9 243 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-216ENST00000437340 RNF19BQ6ZMZ0 732 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 CHSY1Q86X52 802 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 ZNF75CPQ92670 426 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-216ENST00000437340 TRIM43Q96BQ3 446 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-216ENST00000437340 CEP295NLQ96MC4 621 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 IL12RB2Q99665 862 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 SLC39A8Q9C0K1 460 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 UGT1A7Q9HAW7 530 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 UGT1A10Q9HAW8 530 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 UGT1A8Q9HAW9 530 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 PCDH10Q9P2E7 1040 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 SLC17A7Q9P2U7 560 aa26.26■■□□□ 1.79
CPNE1-216ENST00000437340 AAR2Q9Y312 384 aaKnown RBP26.26■■□□□ 1.79
CPNE1-216ENST00000437340 FSBPO95073 299 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 VNN2O95498 520 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 TRIP4Q15650 581 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-216ENST00000437340 PIK3R6Q5UE93 754 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 NAPEPLDQ6IQ20 393 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 CGB2Q6NT52 195 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 TRPM8Q7Z2W7 1104 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 LINC00523Q86TU6 105 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 ZNF276Q8N554 614 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 CNTD1Q8N815 330 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 ATP6V0D2Q8N8Y2 350 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 PIH1D1Q9NWS0 290 aaKnown RBP26.25■■□□□ 1.79
CPNE1-216ENST00000437340 PPARGC1AQ9UBK2 798 aaKnown RBP26.25■■□□□ 1.79
CPNE1-216ENST00000437340 PHTF1Q9UMS5 762 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 NUP205Q92621 2012 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 NT5C1B-RDH14C9J2C7 533 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 EDF1O60869 148 aaKnown RBP26.25■■□□□ 1.79
CPNE1-216ENST00000437340 MGAT5Q09328 741 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 TAF10Q12962 218 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 UBE2Q1Q7Z7E8 422 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 C14orf80Q86SX3 495 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 TMEM135Q86UB9 458 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 DNAAF3Q8N9W5 541 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 PPM1EQ8WY54 764 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 SEPT5Q99719 369 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-216ENST00000437340 IQCGQ9H095 443 aaKnown RBP26.25■■□□□ 1.79
CPNE1-216ENST00000437340 SLC27A5Q9Y2P5 690 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 RPS6KL1Q9Y6S9 549 aa26.25■■□□□ 1.79
CPNE1-216ENST00000437340 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.24■■□□□ 1.79
CPNE1-216ENST00000437340 EFEMP1Q12805 493 aa26.24■■□□□ 1.79
CPNE1-216ENST00000437340 MTA1Q13330 715 aa26.24■■□□□ 1.79
CPNE1-216ENST00000437340 FAM47EQ6ZV65 393 aa26.24■■□□□ 1.79
CPNE1-216ENST00000437340 TMEM173Q86WV6 379 aaPredicted RBP26.24■■□□□ 1.79
CPNE1-216ENST00000437340 C10orf67Q8IYJ2 551 aa26.24■■□□□ 1.79
CPNE1-216ENST00000437340 ZNF683Q8IZ20 524 aa26.24■■□□□ 1.79
CPNE1-216ENST00000437340 FCRL5Q96RD9 977 aa26.24■■□□□ 1.79
CPNE1-216ENST00000437340 IL22Q9GZX6 179 aa26.24■■□□□ 1.79
CPNE1-216ENST00000437340 CRISPLD1Q9H336 500 aa26.24■■□□□ 1.79
CPNE1-216ENST00000437340 KLHL14Q9P2G3 628 aa26.24■■□□□ 1.79
CPNE1-216ENST00000437340 HMX2A2RU54 273 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 KIAA0355O15063 1070 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 USP1O94782 785 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 TIMP1P01033 207 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 RHOQP17081 205 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 ARHGAP36Q6ZRI8 547 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 UMODL1-AS1Q8N2C9 162 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 GPR152Q8TDT2 470 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 ACMSDQ8TDX5 336 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 FATE1Q969F0 183 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 BTN2A3PQ96KV6 586 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 SRPK1Q96SB4 655 aaKnown RBP26.23■■□□□ 1.79
CPNE1-216ENST00000437340 FAM237BA0A1B0GVD1 139 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 SOAT2O75908 522 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 ANXA9O76027 345 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 EFEMP2O95967 443 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 ZDHHC11BP0C7U3 371 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 RFC2P35250 354 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 NDST2P52849 883 aa26.23■■□□□ 1.79
CPNE1-216ENST00000437340 ACTN3Q08043 901 aaPredicted RBP26.23■■□□□ 1.79
CPNE1-216ENST00000437340 CDH17Q12864 832 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms