RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 FLOT2Q14254 428 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ZNF460Q14592 562 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 CHSY1Q86X52 802 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ADGRF2Q8IZF7 708 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 PHTF2Q8N3S3 785 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 PNPLA1Q8N8W4 532 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 OR6P1Q8NGX9 317 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 PTCD3Q96EY7 689 aaKnown RBP8.23□□□□□ -1.09
HPS4-205ENST00000429411 CERS2Q96G23 380 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 CDRT15Q96T59 188 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 CENPKQ9BS16 269 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 FSD1LQ9BXM9 530 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 EBF3Q9H4W6 596 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 SNX15Q9NRS6 342 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 STX18Q9P2W9 335 aaKnown RBP8.23□□□□□ -1.09
HPS4-205ENST00000429411 RUVBL2Q9Y230 463 aaKnown RBP8.23□□□□□ -1.09
HPS4-205ENST00000429411 SSX2IPQ9Y2D8 614 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 TCRBV5S1A1TA0A578 114 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 E7ESA3 106 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 TM7SF2O76062 418 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 USP17L7P0C7H9 530 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 FGFR3P22607 806 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 MPSTP25325 297 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 GP5P40197 560 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ETV4P43268 484 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 WASHC5Q12768 1159 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ACAP1Q15027 740 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ARHGEF6Q15052 776 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ACAD11Q709F0 780 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 SCN4BQ8IWT1 228 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ZNF781Q8N8C0 355 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.23□□□□□ -1.09
HPS4-205ENST00000429411 ABHD8Q96I13 439 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 SIGLEC10Q96LC7 697 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ZFP42Q96MM3 310 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 PIF1Q9H611 641 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 TCF7L2Q9NQB0 619 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 CHRAC1Q9NRG0 131 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 KRT82Q9NSB4 513 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 CLIC5Q9NZA1 410 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ZNF212Q9UDV6 495 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 DCDC2Q9UHG0 476 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 LNPEPQ9UIQ6 1025 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 ARHGAP26Q9UNA1 814 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 LRRC42Q9Y546 428 aa8.23□□□□□ -1.09
HPS4-205ENST00000429411 SIPA1L1O43166 1804 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 CAPN8A6NHC0 703 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ASB14A6NK59 587 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 E7ENQ6 273 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 TK2O00142 265 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 HOXD10P28358 340 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 L1CAMP32004 1257 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 PRAMEP78395 509 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 SLC18A2Q05940 514 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 CTBP1Q13363 440 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 PRPSAP1Q14558 356 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 TMEM198Q66K66 360 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 CEP70Q8NHQ1 597 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 PHF21BQ96EK2 531 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ELMO2Q96JJ3 720 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 TNIP3Q96KP6 325 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ZMAT2Q96NC0 199 aaKnown RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 TUBGCP5Q96RT8 1024 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ECSITQ9BQ95 431 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ZNF670Q9BS34 389 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 BCO2Q9BYV7 579 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 FRMD8Q9BZ67 464 aaPredicted RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 ULBP1Q9BZM6 244 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 TRPV6Q9H1D0 765 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 SEMA6AQ9H2E6 1030 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 COG4Q9H9E3 785 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 COPS7BQ9H9Q2 264 aaPredicted RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 PTPRHQ9HD43 1115 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 DTNAQ9Y4J8 743 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 LRRC37AA6NMS7 1700 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 PLIN3O60664 434 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 SEC24DO94855 1032 aaPredicted RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 VAPBO95292 243 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 PIGNO95427 931 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 C22orf31O95567 290 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 CHRNGP07510 517 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 SERPINA6P08185 405 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 VAV1P15498 845 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ERCC2P18074 760 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 CDH5P33151 784 aaPredicted RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 CRHR1P34998 444 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 TAF6P49848 677 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ARPP19P56211 112 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ABCE1P61221 599 aaKnown RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 SLC12A1Q13621 1099 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 LAMC2Q13753 1193 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 CTC1Q2NKJ3 1217 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 ZNF484Q5JVG2 852 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 SYPL2Q5VXT5 272 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 WSCD1Q658N2 575 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 OLFML1Q6UWY5 402 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 KCNMB4Q86W47 210 aa8.22□□□□□ -1.09
HPS4-205ENST00000429411 PLD6Q8N2A8 252 aaKnown RBP8.22□□□□□ -1.09
HPS4-205ENST00000429411 PCDH20Q8N6Y1 951 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms