RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 EFL1Q7Z2Z2 1120 aaKnown RBP9.9□□□□□ -0.83
SNX13-203ENST00000428135 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 B3GALT6Q96L58 329 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 GPR20Q99678 358 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 FGFBP2Q9BYJ0 223 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 DNAJC18Q9H819 358 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 PCDH9Q9HC56 1237 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 CATSPERZQ9NTU4 200 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 KLHL3Q9UH77 587 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 CDH9Q9ULB4 789 aa9.9□□□□□ -0.83
SNX13-203ENST00000428135 RAD51BO15315 384 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 PTENP60484 403 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 MAMLD1Q13495 774 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 ISLR2Q6UXK2 745 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 PLPPR4Q7Z2D5 763 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 MILR1Q7Z6M3 343 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 C3orf20Q8ND61 904 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 PPTC7Q8NI37 304 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 EPS8L1Q8TE68 723 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 BBS4Q96RK4 519 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TAS2R13Q9NYV9 303 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 IL1RAPL1Q9NZN1 696 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 CFAP97Q9P2B7 532 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 C1orf232A0A0U1RR37 186 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 FFAR3O14843 346 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 GPR42O15529 346 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 GMFGO60234 142 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 NFKB1P19838 968 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 SLC1A6P48664 564 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 CYLC2Q14093 348 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 IRAK1BP1Q5VVH5 260 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 CYP20A1Q6UW02 462 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 ZDHHC17Q8IUH5 632 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 NKX2-3Q8TAU0 364 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 LGMNQ99538 433 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 SEMA3CQ99985 751 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBCDQ9BTW9 1192 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 ACAT2Q9BWD1 397 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 ALG9Q9H6U8 611 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBC1D3DA0A087WVF3 549 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBC1D3IA0A087WXS9 549 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBC1D3EA0A087X179 549 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBC1D3KA0A087X1G2 549 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBC1D3FA6NER0 549 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBC1D3LB9A6J9 549 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 WDR47O94967 919 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBC1D3HP0C7X1 549 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBC1D3GQ6DHY5 549 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBC1D3CQ6IPX1 549 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 BBS7Q8IWZ6 715 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TBC1D3Q8IZP1 549 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 POU5F2Q8N7G0 328 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 METTL6Q8TCB7 284 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 MYCBPQ99417 103 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 DPY30Q9C005 99 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 KLF15Q9UIH9 416 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 A0A0B4J269 797 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 SEPT4O43236 478 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 CCNE2O96020 404 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 FGBP02675 491 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 RBP1P09455 135 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 CCND3P30281 292 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 MARCKSL1P49006 195 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 SARSP49591 514 aaKnown RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 SERPINH1P50454 418 aaKnown RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 MAP3K10Q02779 954 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 PKN2Q16513 984 aaKnown RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 NYAP1Q6ZVC0 841 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 GATAD2AQ86YP4 633 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 RUBCNQ92622 972 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 MCRS1Q96EZ8 462 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 MLPHQ9BV36 600 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 C2orf49Q9BVC5 232 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 FTHL17Q9BXU8 183 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 FRMD8P1Q9BZ68 369 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 NCKIPSDQ9NZQ3 722 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 PCDHA3Q9Y5H8 950 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 ZBTB14O43829 449 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 IFNA16P05015 189 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 CYP2C18P33260 490 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 VEGFBP49765 207 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 SH3BGRP55822 239 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 GTF2BQ00403 316 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 DPYSL3Q14195 570 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 PFKFB4Q16877 469 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 HLA-DQA1Q5Y7H0 255 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 TCP10LQ8TDR4 215 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 PAWRQ96IZ0 340 aaKnown RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 FRMD8Q9BZ67 464 aaPredicted RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 SPATS2LQ9NUQ6 558 aaKnown RBP9.89□□□□□ -0.83
SNX13-203ENST00000428135 PTCH2Q9Y6C5 1203 aa9.89□□□□□ -0.83
SNX13-203ENST00000428135 CHD2O14647 1828 aaKnown RBP9.88□□□□□ -0.83
SNX13-203ENST00000428135 SMPD1P17405 629 aa9.88□□□□□ -0.83
SNX13-203ENST00000428135 PTPN3P26045 913 aa9.88□□□□□ -0.83
SNX13-203ENST00000428135 CLCNKBP51801 687 aa9.88□□□□□ -0.83
SNX13-203ENST00000428135 ZNF280AP59817 542 aaPredicted RBP9.88□□□□□ -0.83
SNX13-203ENST00000428135 SNRPD1P62314 119 aaKnown RBP9.88□□□□□ -0.83
SNX13-203ENST00000428135 POLR2LP62875 67 aaKnown RBP9.88□□□□□ -0.83
SNX13-203ENST00000428135 CRYMQ14894 314 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms