RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 HTATIP2Q9BUP3 242 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 KLF16Q9BXK1 252 aaPredicted RBP17.76■□□□□ 0.43
FN1-208ENST00000426059 BRD8Q9H0E9 1235 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 CERS4Q9HA82 394 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 TLR9Q9NR96 1032 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 UXTQ9UBK9 157 aaPredicted RBP17.76■□□□□ 0.43
FN1-208ENST00000426059 A0A087WUV0 522 aaPredicted RBP17.76■□□□□ 0.43
FN1-208ENST00000426059 DRGXA6NNA5 263 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 WASH4PA8MWX3 477 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 F5H5T6 163 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 J3KR12 359 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 TSPAN3O60637 253 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 RFPL2O75678 378 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 TPSB2P20231 275 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 CCNCP24863 283 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 RPS24P62847 133 aaKnown RBP17.76■□□□□ 0.43
FN1-208ENST00000426059 TPSAB1Q15661 275 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 ITIH5Q86UX2 942 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 MAB21L3Q8N8X9 362 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 CORO1BQ9BR76 489 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 EMILIN2Q9BXX0 1053 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 IGSF9Q9P2J2 1179 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 ZNF212Q9UDV6 495 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 STK39Q9UEW8 545 aa17.76■□□□□ 0.43
FN1-208ENST00000426059 IPO11Q9UI26 975 aaKnown RBP17.76■□□□□ 0.43
FN1-208ENST00000426059 ARHGAP42A6NI28 874 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 GLUD1P00367 558 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 OR1E1P30953 314 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 DMTNQ08495 405 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 C6orf118Q5T5N4 469 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 PPP1R21Q6ZMI0 780 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 CYP4X1Q8N118 509 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 ZFRQ96KR1 1074 aaKnown RBP17.75■□□□□ 0.43
FN1-208ENST00000426059 TEKT5Q96M29 485 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 AGO1Q9UL18 857 aaKnown RBP17.75■□□□□ 0.43
FN1-208ENST00000426059 ZFP37Q9Y6Q3 630 aaPredicted RBP17.75■□□□□ 0.43
FN1-208ENST00000426059 REV3LO60673 3130 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 EXOC1LA0A1B0GW35 172 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 A0A1W2PRU2 124 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 RASA4BC9J798 803 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 PER2O15055 1255 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 EIF3HO15372 352 aaKnown RBP eCLIP17.75■□□□□ 0.437e-35■□□□□ 10.5
FN1-208ENST00000426059 RASA4O43374 803 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 HDCP19113 662 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 NR1D1P20393 614 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 GCAP28676 217 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 SLC11A2P49281 568 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 SESN2P58004 480 aaPredicted RBP17.75■□□□□ 0.43
FN1-208ENST00000426059 SMAD3P84022 425 aaKnown RBP17.75■□□□□ 0.43
FN1-208ENST00000426059 SHHQ15465 462 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 AGBL2Q5U5Z8 902 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 UMODL1-AS1Q8N2C9 162 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 ATP11CQ8NB49 1132 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 MCUQ8NE86 351 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 SPATA22Q8NHS9 363 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 FBF1Q8TES7 1133 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 PRICKLE1Q96MT3 831 aaPredicted RBP17.75■□□□□ 0.43
FN1-208ENST00000426059 TSGA13Q96PP4 275 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 APOL2Q9BQE5 337 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 TMEM109Q9BVC6 243 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 MTIF3Q9H2K0 278 aaKnown RBP17.75■□□□□ 0.43
FN1-208ENST00000426059 MAD1L1Q9Y6D9 718 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 TRANK1O15050 2925 aa17.75■□□□□ 0.43
FN1-208ENST00000426059 MYL4P12829 197 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 ACVRL1P37023 503 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 CLCN4P51793 760 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 TMC8Q8IU68 726 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 OR52K2Q8NGK3 314 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 MLPHQ9BV36 600 aaPredicted RBP17.74■□□□□ 0.43
FN1-208ENST00000426059 LRRC3Q9BY71 257 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 ATXN3LQ9H3M9 355 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 TMEM51Q9NW97 253 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 RABGEF1Q9UJ41 708 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 IRAK3Q9Y616 596 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 DENND4CQ5VZ89 1909 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 MATN3O15232 486 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 MTSS1O43312 755 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 ABHD2P08910 425 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 CCDC149Q6ZUS6 474 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 PLD4Q96BZ4 506 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 PGM2Q96G03 612 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 SIGLEC10Q96LC7 697 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 ROPN1BQ9BZX4 212 aaPredicted RBP17.74■□□□□ 0.43
FN1-208ENST00000426059 GBA3Q9H227 469 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 ROPN1Q9HAT0 212 aaPredicted RBP17.74■□□□□ 0.43
FN1-208ENST00000426059 PLAC1Q9HBJ0 212 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 LZTS1Q9Y250 596 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 CPQQ9Y646 472 aa17.74■□□□□ 0.43
FN1-208ENST00000426059 MTCL1Q9Y4B5 1905 aaKnown RBP17.74■□□□□ 0.43
FN1-208ENST00000426059 A0A0D9SEW6 157 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 MT-CYBP00156 380 aaPredicted RBP17.73■□□□□ 0.43
FN1-208ENST00000426059 MAGEA3P43357 314 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 PPP3CCP48454 512 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 STAT4Q14765 748 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 POLD3Q15054 466 aaPredicted RBP17.73■□□□□ 0.43
FN1-208ENST00000426059 TERF2Q15554 542 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 RBM23Q86U06 439 aaKnown RBP17.73■□□□□ 0.43
FN1-208ENST00000426059 OR52K1Q8NGK4 314 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 ADAMTS19Q8TE59 1207 aa17.73■□□□□ 0.43
FN1-208ENST00000426059 BHMTQ93088 406 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms