RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 MAGEA6P43360 314 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 MAPKAPK2P49137 400 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 RABGAP1LQ5R372 815 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 ANKRD20A2Q5SQ80 823 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 ANKRD20A1Q5TYW2 823 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 ANKRD20A3Q5VUR7 823 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 AFMIDQ63HM1 303 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 LRIG3Q6UXM1 1119 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 IQCKQ8N0W5 287 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 UMODL1-AS1Q8N2C9 162 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 EXOC4Q96A65 974 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 PRKD2Q9BZL6 878 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 RNF38Q9H0F5 515 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 MED4Q9NPJ6 270 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 FAM53CQ9NYF3 392 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 MPP6Q9NZW5 540 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 TRHDEQ9UKU6 1024 aa21.52■■□□□ 1.04
TPM1-208ENST00000404484 DOCK6Q96HP0 2047 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 EIF3HO15372 352 aaKnown RBP eCLIP21.51■■□□□ 1.03
TPM1-208ENST00000404484 CCL16O15467 120 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 XYLBO75191 536 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 POU2F2P09086 479 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 SP100P23497 879 aaPredicted RBP21.51■■□□□ 1.03
TPM1-208ENST00000404484 CCNCP24863 283 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 DDX6P26196 483 aaKnown RBP eCLIP21.51■■□□□ 1.03
TPM1-208ENST00000404484 CHKAP35790 457 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 ARL4CP56559 192 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 HIF1AQ16665 826 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 C5orf22Q49AR2 442 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 DENND2CQ68D51 928 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 NADSYN1Q6IA69 706 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 TIGD7Q6NT04 549 aaPredicted RBP21.51■■□□□ 1.03
TPM1-208ENST00000404484 CENPUQ71F23 418 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 ARHGAP12Q8IWW6 846 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 SMG7Q92540 1137 aaKnown RBP21.51■■□□□ 1.03
TPM1-208ENST00000404484 CELF6Q96J87 481 aaKnown RBP21.51■■□□□ 1.03
TPM1-208ENST00000404484 RBM15Q96T37 977 aaKnown RBP eCLIP21.51■■□□□ 1.03
TPM1-208ENST00000404484 CORO1BQ9BR76 489 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 OGFRQ9NZT2 677 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 SEPT10Q9P0V9 454 aa21.51■■□□□ 1.03
TPM1-208ENST00000404484 OBSL1O75147 1896 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 TRAV19A0A0A6YYK7 116 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 DFFAO00273 331 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 OPA1O60313 960 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 PTPN2P17706 415 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 EPHA5P54756 1037 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 NRLP54845 237 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 EIF3BP55884 814 aaKnown RBP21.5■■□□□ 1.03
TPM1-208ENST00000404484 KCNJ11Q14654 390 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 UAP1Q16222 522 aaPredicted RBP21.5■■□□□ 1.03
TPM1-208ENST00000404484 GAREM2Q75VX8 874 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 DENND1CQ8IV53 801 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 HS6ST3Q8IZP7 471 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 LGI2Q8N0V4 545 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 GOLGA6L1Q8N7Z2 621 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 ATXN3LQ9H3M9 355 aa21.5■■□□□ 1.03
TPM1-208ENST00000404484 DOCK4Q8N1I0 1966 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 ARHGAP42A6NI28 874 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 MYL4P12829 197 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 TPSB2P20231 275 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 SLC7A9P82251 487 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 CDK16Q00536 496 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 WASHC5Q12768 1159 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 SEMA5AQ13591 1074 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 TPSAB1Q15661 275 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 PARP6Q2NL67 630 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 FAM133BQ5BKY9 247 aaKnown RBP21.49■■□□□ 1.03
TPM1-208ENST00000404484 ADGRF1Q5T601 910 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 TTC39BQ5VTQ0 682 aaPredicted RBP21.49■■□□□ 1.03
TPM1-208ENST00000404484 TXNDC8Q6A555 127 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 ITPRIPL1Q6GPH6 555 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 TP53INP2Q8IXH6 220 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 PDIK1LQ8N165 341 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 KRT222Q8N1A0 295 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 LRRN4Q8WUT4 740 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 IGSF8Q969P0 613 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 TTC25Q96NG3 672 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 ZIM3Q96PE6 472 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 ETNK1Q9HBU6 452 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 GKN1Q9NS71 199 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 KLHL8Q9P2G9 620 aaPredicted RBP21.49■■□□□ 1.03
TPM1-208ENST00000404484 IGSF9Q9P2J2 1179 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 LSM7Q9UK45 103 aaKnown RBP21.49■■□□□ 1.03
TPM1-208ENST00000404484 PLAAQ9Y263 795 aa21.49■■□□□ 1.03
TPM1-208ENST00000404484 SOBPA7XYQ1 873 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 E7EVH7 732 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 CKMP06732 381 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 IRF1P10914 325 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 PTPN3P26045 913 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 CYP4F8P98187 520 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 ANO4Q32M45 955 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 PARP15Q460N3 678 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 ARHGAP15Q53QZ3 475 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 ANKRD22Q5VYY1 191 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 TFAP2DQ7Z6R9 452 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 ARL14EPQ8N8R7 260 aaPredicted RBP21.48■■□□□ 1.03
TPM1-208ENST00000404484 NETO2Q8NC67 525 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 MCUQ8NE86 351 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 FATE1Q969F0 183 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 ZFRQ96KR1 1074 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms