RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 TBC1D30Q9Y2I9 924 aa23.84■■□□□ 1.41
CNN3-202ENST00000394202 MYOFQ9NZM1 2061 aa23.84■■□□□ 1.41
CNN3-202ENST00000394202 NYNRINQ9P2P1 1898 aaKnown RBP23.84■■□□□ 1.41
CNN3-202ENST00000394202 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.83■■□□□ 1.41
CNN3-202ENST00000394202 TP73O15350 636 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 ZNF177Q13360 481 aaPredicted RBP23.83■■□□□ 1.41
CNN3-202ENST00000394202 WDR93Q6P2C0 686 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 ATPAF2Q8N5M1 289 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 OR7D4Q8NG98 312 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 ZNF419Q96HQ0 510 aaPredicted RBP23.83■■□□□ 1.41
CNN3-202ENST00000394202 RIPOR3Q96MK2 946 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 PCDH9Q9HC56 1237 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 GRHL1Q9NZI5 618 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 NUP210Q8TEM1 1887 aaPredicted RBP23.83■■□□□ 1.41
CNN3-202ENST00000394202 J3KR12 359 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 ADCY8P40145 1251 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 GPS1Q13098 491 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 TTC39BQ5VTQ0 682 aaPredicted RBP23.83■■□□□ 1.41
CNN3-202ENST00000394202 FYB2Q5VWT5 728 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 TRIM68Q6AZZ1 485 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 ZFYVE19Q96K21 471 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 TSGA13Q96PP4 275 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 KIF9Q9HAQ2 790 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 TRPV4Q9HBA0 871 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 DONSONQ9NYP3 566 aa23.83■■□□□ 1.41
CNN3-202ENST00000394202 CFAP69A5D8W1 941 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 HEPACAM2A8MVW5 462 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 ZBTB17Q13105 803 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 MPPE1Q53F39 396 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 IFT20Q8IY31 132 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 ARHGEF2Q92974 986 aaKnown RBP23.82■■□□□ 1.4
CNN3-202ENST00000394202 NEUROG2Q9H2A3 272 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 IPO11Q9UI26 975 aaKnown RBP23.82■■□□□ 1.4
CNN3-202ENST00000394202 USP15Q9Y4E8 981 aaPredicted RBP23.82■■□□□ 1.4
CNN3-202ENST00000394202 H0Y626 953 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 RNF103O00237 685 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 SP100P23497 879 aaPredicted RBP23.82■■□□□ 1.4
CNN3-202ENST00000394202 ECHS1P30084 290 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 GBP2P32456 591 aaPredicted RBP23.82■■□□□ 1.4
CNN3-202ENST00000394202 CLCN6P51797 869 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 GNA12Q03113 381 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 P3H1Q32P28 736 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 LY6G5CQ5SRR4 150 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 CCNI2Q6ZMN8 369 aaPredicted RBP23.82■■□□□ 1.4
CNN3-202ENST00000394202 CCDC13Q8IYE1 715 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 BRD8Q9H0E9 1235 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 RETREG1Q9H6L5 497 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 TBC1D14Q9P2M4 693 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 NFU1Q9UMS0 254 aa23.82■■□□□ 1.4
CNN3-202ENST00000394202 SHROOM3Q8TF72 1996 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 LUC7L3O95232 432 aaKnown RBP23.81■■□□□ 1.4
CNN3-202ENST00000394202 LAMP2P13473 410 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 PTPN3P26045 913 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 MTHFRP42898 656 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 SERINC3Q13530 473 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 PARP15Q460N3 678 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 RHBDF2Q6PJF5 856 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 LEKR1Q6ZMV7 388 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 BPIFB1Q8TDL5 484 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 IRF7Q92985 503 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 GUCD1Q96NT3 240 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 PLA2G2FQ9BZM2 168 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 SPHK2Q9NRA0 654 aa23.81■■□□□ 1.4
CNN3-202ENST00000394202 C5orf60A6NFR6 353 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 ARHGAP42A6NI28 874 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 GCATO75600 419 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 PEX11BO96011 259 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 RHOCP08134 193 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 GLDCP23378 1020 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 CCNCP24863 283 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 MZF1P28698 734 aaPredicted RBP23.8■■□□□ 1.4
CNN3-202ENST00000394202 DRG2P55039 364 aaKnown RBP23.8■■□□□ 1.4
CNN3-202ENST00000394202 YBEYP58557 167 aaPredicted RBP23.8■■□□□ 1.4
CNN3-202ENST00000394202 C6orf118Q5T5N4 469 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 RNF219Q5W0B1 726 aaPredicted RBP23.8■■□□□ 1.4
CNN3-202ENST00000394202 RNF43Q68DV7 783 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 SETD3Q86TU7 594 aaPredicted RBP23.8■■□□□ 1.4
CNN3-202ENST00000394202 ZNF354CQ86Y25 554 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 ZNF567Q8N184 647 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 PPM1EQ8WY54 764 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 SUSD6Q92537 303 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 DUS2Q9NX74 493 aaKnown RBP23.8■■□□□ 1.4
CNN3-202ENST00000394202 CD207Q9UJ71 328 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 ILVBLA1L0T0 632 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 TYW5A2RUC4 315 aaKnown RBP23.8■■□□□ 1.4
CNN3-202ENST00000394202 F5H423 210 aaPredicted RBP23.8■■□□□ 1.4
CNN3-202ENST00000394202 SEC31AO94979 1220 aaKnown RBP23.8■■□□□ 1.4
CNN3-202ENST00000394202 KCNA5P22460 613 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 ANKRD20A2Q5SQ80 823 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 MPP7Q5T2T1 576 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 ANKRD20A1Q5TYW2 823 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 ANKRD20A3Q5VUR7 823 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 PARM1Q6UWI2 310 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 ZDHHC24Q6UX98 284 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 VITQ6UXI7 678 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 MFN1Q8IWA4 741 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 OSCP1Q8WVF1 389 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 SPON2Q9BUD6 331 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 MAGEH1Q9H213 219 aa23.8■■□□□ 1.4
CNN3-202ENST00000394202 ZFP14Q9HCL3 533 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms