RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 ZMYM1Q5SVZ6 1142 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 GLT6D1Q7Z4J2 308 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 JAMLQ86YT9 394 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 MINDY2Q8NBR6 621 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 RNF121Q9H920 327 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 GATBO75879 557 aaKnown RBP13.49□□□□□ -0.25
HIPK3-202ENST00000379016 RASGRP1O95267 797 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 CYP2C8P10632 490 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 USP46P62068 366 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 PPP1R15BQ5SWA1 713 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 PSMA8Q8TAA3 256 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 FBXO30Q8TB52 745 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 CCDC167Q9P0B6 97 aa13.49□□□□□ -0.25
HIPK3-202ENST00000379016 H0Y858 1186 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 NCAM2O15394 837 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 ECHS1P30084 290 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 FAUP35544 74 aaKnown RBP13.48□□□□□ -0.25
HIPK3-202ENST00000379016 SNX20Q7Z614 316 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 SMPDL3BQ92485 455 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 TMEM237Q96Q45 408 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 ZNF350Q9GZX5 532 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 PCDH12Q9NPG4 1184 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 NUDT5Q9UKK9 219 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 NUP50Q9UKX7 468 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 PHTF1Q9UMS5 762 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 C17orf102A2RUQ5 167 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 ANXA6P08133 673 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 GHRP10912 638 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 NQO1P15559 274 aaKnown RBP13.48□□□□□ -0.25
HIPK3-202ENST00000379016 AP2S1P53680 142 aaPredicted RBP13.48□□□□□ -0.25
HIPK3-202ENST00000379016 DNASE1L3Q13609 305 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 SEZ6Q53EL9 994 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 MPPE1Q53F39 396 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 CERCAMQ5T4B2 595 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 CXorf40BQ96DE9 158 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 SGSM3Q96HU1 749 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 C5orf34Q96MH7 638 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 HIST1H2AAQ96QV6 131 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 UGT2B28Q9BY64 529 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 APEX2Q9UBZ4 518 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 CLOCKO15516 846 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 C9P02748 559 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 NT5C2P49902 561 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 PIK3R6Q5UE93 754 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 AADACL4Q5VUY2 407 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 TRIM40Q6P9F5 258 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 ZDHHC13Q8IUH4 622 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 DEFB107AQ8IZN7 70 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 DHRSXQ8N5I4 330 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 MYOCQ99972 504 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 ZCCHC2Q9C0B9 1178 aaKnown RBP13.48□□□□□ -0.25
HIPK3-202ENST00000379016 ATXN3LQ9H3M9 355 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 IKZF2Q9UKS7 526 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 NDUFAF1Q9Y375 327 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 TAF6LQ9Y6J9 622 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 FAM58BPP0C7Q3 252 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 ALAS2P22557 587 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 IL12AP29459 219 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 NRF1Q16656 503 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 FBXL19Q6PCT2 694 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 MID1IP1Q9NPA3 183 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 RGSL1A5PLK6 1076 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 RASAL3Q86YV0 1011 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 GGA3Q9NZ52 723 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 CASTOR2A6NHX0 329 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 ZBTB14O43829 449 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 SLC25A25Q6KCM7 469 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 SETD9Q8NE22 299 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 SLC22A8Q8TCC7 542 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 PTCD2Q8WV60 388 aaKnown RBP13.48□□□□□ -0.25
HIPK3-202ENST00000379016 ZDHHC6Q9H6R6 413 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 HPF1Q9NWY4 346 aa13.48□□□□□ -0.25
HIPK3-202ENST00000379016 ARHGEF33A8MVX0 844 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 SCGB1D2O95969 90 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 FASTKQ14296 549 aaKnown RBP13.47□□□□□ -0.25
HIPK3-202ENST00000379016 SNRNP35Q16560 246 aaKnown RBP13.47□□□□□ -0.25
HIPK3-202ENST00000379016 CXorf57Q6NSI4 855 aaKnown RBP13.47□□□□□ -0.25
HIPK3-202ENST00000379016 CHERPQ8IWX8 916 aaKnown RBP13.47□□□□□ -0.25
HIPK3-202ENST00000379016 RNF148Q8N7C7 305 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 TEX19Q8NA77 164 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 MAGEC3Q8TD91 643 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 CPB2Q96IY4 423 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 PLGRKTQ9HBL7 147 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 SYCP2Q9BX26 1530 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 SPAG6O75602 509 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 PPM1BO75688 479 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 PPP1R37O75864 691 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 SLC26A3P40879 764 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 SNAPC2Q13487 334 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 BARGINQ6ZT62 677 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 FAM126BQ8IXS8 530 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 USP38Q8NB14 1042 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 C3orf20Q8ND61 904 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 PCDH19Q8TAB3 1148 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 IKZF3Q9UKT9 509 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 NOX1Q9Y5S8 564 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 CCT8L1PA6NM43 557 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 MATN4O95460 622 aa13.47□□□□□ -0.25
HIPK3-202ENST00000379016 AQP5P55064 265 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms