RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 KLHL8Q9P2G9 620 aaPredicted RBP14.3□□□□□ -0.12
MSH5-202ENST00000375740 IGSF9Q9P2J2 1179 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 PLLPQ9Y342 182 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 ALDH1A2O94788 518 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 LMNAP02545 664 aaKnown RBP14.3□□□□□ -0.12
MSH5-202ENST00000375740 ITGB1P05556 798 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 CAP1Q01518 475 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 TUSC3Q13454 348 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 OLIG2Q13516 323 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 MYBPC3Q14896 1274 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 OR10T2Q8NGX3 314 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 PKMYT1Q99640 499 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 TRMT13Q9NUP7 481 aaKnown RBP14.3□□□□□ -0.12
MSH5-202ENST00000375740 SLC17A6Q9P2U8 582 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 OR12D3Q9UGF7 316 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 TLL2Q9Y6L7 1015 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 F8W810 466 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 M0QZQ0 153 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 TROVE2P10155 538 aaKnown RBP eCLIP14.29□□□□□ -0.12
MSH5-202ENST00000375740 YY1P25490 414 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 SERPINB9P50453 376 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 RINLQ6ZS11 566 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 TAC4Q86UU9 113 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 RSPH1Q8WYR4 309 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 IRGQQ8WZA9 623 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 APBB2Q92870 758 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 AGAP3Q96P47 875 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 SPATA16Q9BXB7 569 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 DNAAF2Q9NVR5 837 aaKnown RBP14.29□□□□□ -0.12
MSH5-202ENST00000375740 SYBUQ9NX95 663 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 LNPEPQ9UIQ6 1025 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 OVOS1Q6IE37 1185 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 NDUFAF2Q8N183 169 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 SMC1BQ8NDV3 1235 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 SCAMP5Q8TAC9 235 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 RNF34Q969K3 372 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 BTBD10Q9BSF8 475 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 GALNT8Q9NY28 637 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 PHF24Q9UPV7 400 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 NOD1Q9Y239 953 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 RAD54BQ9Y620 910 aa14.29□□□□□ -0.12
MSH5-202ENST00000375740 C2orf71A6NGG8 1288 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 C2CD2LO14523 706 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 ZSCAN9O15535 394 aaPredicted RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 ZBTB24O43167 697 aaPredicted RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 ELNP15502 786 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 PGAM1P18669 254 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 PPIDQ08752 370 aaKnown RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 THOC5Q13769 683 aaKnown RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 OR52K1Q8NGK4 314 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 ZNF184Q99676 751 aaPredicted RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 MECRQ9BV79 373 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 FBXO6Q9NRD1 293 aaPredicted RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 DSEQ9UL01 958 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 ABT1Q9ULW3 272 aaKnown RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 NUP205Q92621 2012 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 NCAM2O15394 837 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 LRIG2O94898 1065 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 NIPAL4Q0D2K0 466 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 CES3Q6UWW8 571 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 MARK2Q7KZI7 788 aaKnown RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 THEM5Q8N1Q8 247 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 ZNF398Q8TD17 642 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 DQX1Q8TE96 717 aaKnown RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 TRIM55Q9BYV6 548 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 TAS2R1Q9NYW7 299 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 GYG2O15488 501 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 USP12O75317 370 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 ITGA7Q13683 1181 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 SMAD1Q15797 465 aaKnown RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 TRIM71Q2Q1W2 868 aaKnown RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 DCLRE1AQ6PJP8 1040 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 TIFABQ6ZNK6 161 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 PTCD3Q96EY7 689 aaKnown RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 PGLYRP2Q96PD5 576 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 MKS1Q9NXB0 559 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 PDP2Q9P2J9 529 aa14.28□□□□□ -0.12
MSH5-202ENST00000375740 STX18Q9P2W9 335 aaKnown RBP14.28□□□□□ -0.12
MSH5-202ENST00000375740 A0A0G2JND7 137 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 TMEM88BA6NKF7 163 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 CCDC22O60826 627 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 CRHR1P34998 444 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 CPA2P48052 419 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 GALNT2Q10471 571 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 FAM26DQ5JW98 314 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 PACS1Q6VY07 963 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 TTC7BQ86TV6 843 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 ZNF598Q86UK7 904 aaKnown RBP14.27□□□□□ -0.12
MSH5-202ENST00000375740 CDKL2Q92772 493 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 UROC1Q96N76 676 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 NAT9Q9BTE0 207 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 IL1RAPL1Q9NZN1 696 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 HEY2Q9UBP5 337 aa14.27□□□□□ -0.12
MSH5-202ENST00000375740 hCG_2014768A0A024R1R8 64 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 MAP3K7O43318 606 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 SRGAP2BP0DMP2 458 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 MX2P20592 715 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 CNTFP26441 200 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 CD68P34810 354 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms