RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 CPA6Q8N4T0 437 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 ECT2Q9H8V3 914 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 RRN3Q9NYV6 651 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 ZNF510Q9Y2H8 683 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 PIAS3Q9Y6X2 628 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 F5P12259 2224 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 KIAA1549LQ6ZVL6 1849 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 TCRBV5S1A1TA0A578 114 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 TLDC2A0PJX2 215 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 VIMP08670 466 aaKnown RBP21.05■□□□□ 0.96
SYNC-201ENST00000373484 GLULP15104 373 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 ITIH2P19823 946 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 SKIV2L2P42285 1042 aaKnown RBP21.05■□□□□ 0.96
SYNC-201ENST00000373484 TBX4P57082 545 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 TTC27Q6P3X3 843 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 TTC8Q8TAM2 541 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 NT5C3BQ969T7 300 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 SLC39A13Q96H72 371 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 NPY6RQ99463 290 aa21.05■□□□□ 0.96
SYNC-201ENST00000373484 PRMT1Q99873 361 aaKnown RBP21.05■□□□□ 0.96
SYNC-201ENST00000373484 ECEL1O95672 775 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 COMTP21964 271 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 HARS2P49590 506 aaKnown RBP21.04■□□□□ 0.96
SYNC-201ENST00000373484 STARD6P59095 220 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 SIX1Q15475 284 aaPredicted RBP21.04■□□□□ 0.96
SYNC-201ENST00000373484 NUGGCQ68CJ6 796 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 TRNP1Q6NT89 227 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 TPRG1Q6ZUI0 275 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 DENND1CQ8IV53 801 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 N4BP2L2Q92802 583 aaPredicted RBP21.04■□□□□ 0.96
SYNC-201ENST00000373484 GRAMD1AQ96CP6 724 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 SHDQ96IW2 340 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 FCRL2Q96LA5 508 aaPredicted RBP21.04■□□□□ 0.96
SYNC-201ENST00000373484 ANKRD27Q96NW4 1050 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 ELAC2Q9BQ52 826 aaKnown RBP21.04■□□□□ 0.96
SYNC-201ENST00000373484 DDX23Q9BUQ8 820 aaKnown RBP21.04■□□□□ 0.96
SYNC-201ENST00000373484 C8orf33Q9H7E9 229 aaPredicted RBP21.04■□□□□ 0.96
SYNC-201ENST00000373484 C11orf16Q9NQ32 467 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 AGO1Q9UL18 857 aaKnown RBP21.04■□□□□ 0.96
SYNC-201ENST00000373484 STAP1Q9ULZ2 295 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 SHISA7A6NL88 538 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 CYP17A1P05093 508 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 RRM1P23921 792 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 SOX9P48436 509 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 RWDD2BP57060 319 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 OTUD1Q5VV17 481 aaPredicted RBP21.04■□□□□ 0.96
SYNC-201ENST00000373484 CEP128Q6ZU80 1094 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 CCDC105Q8IYK2 499 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 KRT35Q92764 455 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 MSANTD3Q96H12 275 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 ACTL7BQ9Y614 415 aa21.04■□□□□ 0.96
SYNC-201ENST00000373484 GJB6O95452 261 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 KRT3P12035 628 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 CTHP32929 405 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 NR1H3Q13133 447 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 DHCR24Q15392 516 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 DNAJC24Q6P3W2 148 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 RHBDF2Q6PJF5 856 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 EXOC3L1Q86VI1 746 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 RALGPS2Q86X27 583 aaPredicted RBP21.03■□□□□ 0.96
SYNC-201ENST00000373484 UNC45BQ8IWX7 931 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 EMC1Q8N766 993 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 JOSD2Q8TAC2 188 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 CHFRQ96EP1 664 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 RSRC1Q96IZ7 334 aaKnown RBP21.03■□□□□ 0.96
SYNC-201ENST00000373484 ADAM33Q9BZ11 813 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 DDIT4Q9NX09 232 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 ARL2BPQ9Y2Y0 163 aa21.03■□□□□ 0.96
SYNC-201ENST00000373484 SIGLEC16A6NMB1 481 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 SPECC1L-ADORA2AF8WAN1 911 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 M0QYT0 321 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 LATS1O95835 1130 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 PDGFBP01127 241 aaPredicted RBP21.02■□□□□ 0.96
SYNC-201ENST00000373484 NQO1P15559 274 aaKnown RBP21.02■□□□□ 0.96
SYNC-201ENST00000373484 GJA4P35212 333 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 CCDC15Q0P6D6 951 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 BNIP1Q12981 228 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 SLC25A52Q3SY17 297 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 PPP1R15BQ5SWA1 713 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 BMP8AQ7Z5Y6 402 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 RELL1Q8IUW5 271 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 FAM217AQ8IXS0 508 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 EPS8L3Q8TE67 593 aaKnown RBP21.02■□□□□ 0.96
SYNC-201ENST00000373484 MIEF2Q96C03 454 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 PGAP3Q96FM1 320 aaPredicted RBP21.02■□□□□ 0.96
SYNC-201ENST00000373484 SPHK2Q9NRA0 654 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 LGALS13Q9UHV8 139 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 STOML2Q9UJZ1 356 aa21.02■□□□□ 0.96
SYNC-201ENST00000373484 C2CD4BA6NLJ0 364 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 TFE3P19532 575 aaPredicted RBP21.01■□□□□ 0.95
SYNC-201ENST00000373484 SULT1E1P49888 294 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 LY6G5CQ5SRR4 150 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 PLEKHA7Q6IQ23 1121 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 C1orf228Q6PIY5 440 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 ADAT2Q7Z6V5 191 aaKnown RBP21.01■□□□□ 0.95
SYNC-201ENST00000373484 GRK7Q8WTQ7 553 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 CKAP2Q8WWK9 683 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 AZIN2Q96A70 460 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 TRIM11Q96F44 468 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 CFAP57Q96MR6 1250 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms