RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SERPINB9P50453 376 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 YWHAEP62258 255 aaKnown RBP11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 TMPRSS15P98073 1019 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 BST1Q10588 318 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 MED21Q13503 144 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 MAP7Q14244 749 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 KCNJ11Q14654 390 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 USP41Q3LFD5 358 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 KBTBD12Q3ZCT8 623 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 SV2CQ496J9 727 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 EFHC1Q5JVL4 640 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 SH2D4BQ5SQS7 431 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 PLPP4Q5VZY2 271 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 DHDDSQ86SQ9 333 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 TTC7BQ86TV6 843 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 TREML1Q86YW5 311 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 LRRC52Q8N7C0 313 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 CMASQ8NFW8 434 aaPredicted RBP11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 OR6Y1Q8NGX8 325 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 B4GALNT2Q8NHY0 566 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 ITFG2Q969R8 447 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 SENP8Q96LD8 212 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 LHX5Q9H2C1 402 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 TLR9Q9NR96 1032 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 THAP1Q9NVV9 213 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 PAK5Q9P286 719 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 NXF1Q9UBU9 619 aaKnown RBP11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 SNX9Q9Y5X1 595 aa11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.74□□□□□ -0.53
TSPAN1-201ENST00000372003 SDR42E2A6NKP2 422 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 CYB561D2O14569 222 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 CASQ2O14958 399 aaPredicted RBP11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 KRT38O76015 456 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 C1QAP02745 245 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 UBTFL6P0CB48 400 aaPredicted RBP11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 PSMA2P25787 234 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 PRDX6P30041 224 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 CRHR1P34998 444 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 GDF10P55107 478 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 EIF3EP60228 445 aaKnown RBP11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 UBE3AQ05086 875 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 BTKQ06187 659 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 ELAVL2Q12926 359 aaKnown RBP11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 CAMK1Q14012 370 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 ZNF699Q32M78 642 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 RTP2Q5QGT7 225 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 SPOPLQ6IQ16 392 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 PRSS55Q6UWB4 352 aaPredicted RBP11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 CYS1Q717R9 158 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 PRPF39Q86UA1 669 aaKnown RBP11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 ALYREFQ86V81 257 aaKnown RBP11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 TMEM126BQ8IUX1 230 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 NUDCD3Q8IVD9 361 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 SUSD3Q96L08 255 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 TUBGCP5Q96RT8 1024 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 NDNQ99608 321 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 KLF6Q99612 283 aaPredicted RBP11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 TTPALQ9BTX7 342 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 THTPAQ9BU02 230 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 KLHL4Q9C0H6 718 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 CHMP2BQ9UQN3 213 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 LZTS1Q9Y250 596 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 CHD9Q3L8U1 2897 aa11.73□□□□□ -0.53
TSPAN1-201ENST00000372003 A0A088AWK7 358 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 TRIM49D1C9J1S8 452 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 HUS1O60921 280 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 EFEMP2O95967 443 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 ASS1P00966 412 aaKnown RBP11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 URODP06132 367 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 BPGMP07738 259 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 ACAT1P24752 427 aaKnown RBP11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 ATICP31939 592 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 CPOXP36551 454 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 GLUD2P49448 558 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 GAD2Q05329 585 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 TFDP2Q14188 446 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 ADGRE1Q14246 886 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 NOMO1Q15155 1222 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 HSF5Q4G112 596 aaPredicted RBP11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 PABPC1LQ4VXU2 614 aaKnown RBP11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 TXNRD3NBQ6F5E7 133 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 GPR153Q6NV75 609 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 PGM2L1Q6PCE3 622 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 LCA5Q86VQ0 697 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 ARID3BQ8IVW6 561 aaPredicted RBP11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 WDR75Q8IWA0 830 aaKnown RBP11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 UNC45BQ8IWX7 931 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 RNF168Q8IYW5 571 aaPredicted RBP11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 MCUQ8NE86 351 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 ACMSDQ8TDX5 336 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 MYLIPQ8WY64 445 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 IRGQQ8WZA9 623 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 HAUS1Q96CS2 278 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 RTP4Q96DX8 246 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 GAS2L1Q99501 681 aaPredicted RBP11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 HERC2P3Q9BVR0 1158 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 ZBP1Q9H171 429 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 XYLT2Q9H1B5 865 aa11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 MRPL17Q9NRX2 175 aaKnown RBP11.72□□□□□ -0.53
TSPAN1-201ENST00000372003 PLK2Q9NYY3 685 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms