RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PHLDB2Q86SQ0 1253 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 OSTM1Q86WC4 334 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 ABI1Q8IZP0 508 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 CPA6Q8N4T0 437 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 UBA3Q8TBC4 463 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 SLC35F5Q8WV83 523 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 CCDC140Q96MF4 163 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 HNRNPABQ99729 332 aaKnown RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 RHOXF2Q9BQY4 288 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 C17orf80Q9BSJ5 609 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 SLC13A1Q9BZW2 595 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 EMC7Q9NPA0 242 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 RBM12Q9NTZ6 932 aaKnown RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 DDX43Q9NXZ2 648 aaKnown RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 RAB21Q9UL25 225 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 CDH9Q9ULB4 789 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 GPR55Q9Y2T6 319 aaPredicted RBP9.1□□□□□ -0.95
TPM3-213ENST00000368545 PCDHB7Q9Y5E2 793 aa9.1□□□□□ -0.95
TPM3-213ENST00000368545 E5RJQ4 531 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 GOLGA8SH3BPF8 625 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 KRIT1O00522 736 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 ERLIN1O75477 346 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 SCG5P05408 212 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 PTPN1P18031 435 aaKnown RBP9.09□□□□□ -0.95
TPM3-213ENST00000368545 TYMPP19971 482 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 CLLU1OSQ5K130 101 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 EXOSC6Q5RKV6 272 aaKnown RBP9.09□□□□□ -0.95
TPM3-213ENST00000368545 FAM102AQ5T9C2 384 aaPredicted RBP9.09□□□□□ -0.95
TPM3-213ENST00000368545 TMEM184AQ6ZMB5 413 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 TMEM110Q86TL2 294 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 DDX53Q86TM3 631 aaKnown RBP9.09□□□□□ -0.95
TPM3-213ENST00000368545 DBF4BQ8NFT6 615 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 MAIP1Q8WWC4 291 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 HSFY1Q96LI6 401 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 FAM193BQ96PV7 902 aaPredicted RBP9.09□□□□□ -0.95
TPM3-213ENST00000368545 YME1L1Q96TA2 773 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 SYT15Q9BQS2 421 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 PARD6BQ9BYG5 372 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 ANLNQ9NQW6 1124 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 SMARCAL1Q9NZC9 954 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 ANGPTL2Q9UKU9 493 aa9.09□□□□□ -0.95
TPM3-213ENST00000368545 USP15Q9Y4E8 981 aaPredicted RBP9.09□□□□□ -0.95
TPM3-213ENST00000368545 FNDC1Q4ZHG4 1894 aaPredicted RBP9.09□□□□□ -0.95
TPM3-213ENST00000368545 PTPRDP23468 1912 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 CACNA1BQ00975 2339 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 AQP7O14520 342 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 XPO1O14980 1071 aaKnown RBP9.08□□□□□ -0.96
TPM3-213ENST00000368545 CCDC130P13994 396 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 PSMA2P25787 234 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 ADORA2BP29275 332 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 CETN2P41208 172 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 MARCKSL1P49006 195 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 RPL34P49207 117 aaKnown RBP9.08□□□□□ -0.96
TPM3-213ENST00000368545 ATXN1P54253 815 aaKnown RBP9.08□□□□□ -0.96
TPM3-213ENST00000368545 RNASELQ05823 741 aaKnown RBP9.08□□□□□ -0.96
TPM3-213ENST00000368545 GPNMBQ14956 572 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 PMF1Q6P1K2 205 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 FBXO38Q6PIJ6 1188 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 OLFML1Q6UWY5 402 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 FAM183BPQ6ZVS7 135 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 POLNQ7Z5Q5 900 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 KATNAL2Q8IYT4 538 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 SLC2A14Q8TDB8 520 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 NETO1Q8TDF5 533 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 ISL2Q96A47 359 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 ACBD6Q9BR61 282 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 PAAF1Q9BRP4 392 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 MRPL9Q9BYD2 267 aaKnown RBP9.08□□□□□ -0.96
TPM3-213ENST00000368545 SLITRK6Q9H5Y7 841 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 PPCSQ9HAB8 311 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 AAASQ9NRG9 546 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 CACNG4Q9UBN1 327 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 FBXL21Q9UKT6 434 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 MTUS1Q9ULD2 1270 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 ANKRD6Q9Y2G4 727 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 TET1Q8NFU7 2136 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 PATJQ8NI35 1801 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 TRAPPC3O43617 180 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 FAM200BP0CF97 657 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 RFC1P35251 1148 aaPredicted RBP9.08□□□□□ -0.96
TPM3-213ENST00000368545 RNASE9P60153 205 aaKnown RBP9.08□□□□□ -0.96
TPM3-213ENST00000368545 DEFB103AP81534 67 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 GAS6Q14393 721 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 MAPRE1Q15691 268 aaKnown RBP9.08□□□□□ -0.96
TPM3-213ENST00000368545 HADHQ16836 314 aaKnown RBP9.08□□□□□ -0.96
TPM3-213ENST00000368545 OR6B2Q6IFH4 312 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 ARCQ7LC44 396 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 COLGALT2Q8IYK4 626 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 THEM5Q8N1Q8 247 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 EXD1Q8NHP7 514 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 UBASH3BQ8TF42 649 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 RBM41Q96IZ5 413 aaKnown RBP9.08□□□□□ -0.96
TPM3-213ENST00000368545 RUNDC3BQ96NL0 473 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 NCAPGQ9BPX3 1015 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 DUSP16Q9BY84 665 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 TBC1D13Q9NVG8 400 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.08□□□□□ -0.96
TPM3-213ENST00000368545 ASNSD1Q9NWL6 643 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 AP4E1Q9UPM8 1137 aa9.08□□□□□ -0.96
TPM3-213ENST00000368545 PCDHB12Q9Y5F1 795 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms