RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 NAB1Q13506 487 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 KBTBD12Q3ZCT8 623 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 NAPEPLDQ6IQ20 393 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 FBXL22Q6P050 247 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 SRRM1Q8IYB3 904 aaKnown RBP16.62■□□□□ 0.25
HPS1-202ENST00000338546 CFAP36Q96G28 342 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 AGAP3Q96P47 875 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 TRABDQ9H4I3 376 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 CASS4Q9NQ75 786 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 MOCS1Q9NZB8 636 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 BFARQ9NZS9 450 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 VANGL2Q9ULK5 521 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 MAD1L1Q9Y6D9 718 aa16.62■□□□□ 0.25
HPS1-202ENST00000338546 FAM47DPA6NHR8 397 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 FAM159BA6NKW6 160 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 NFKB1P19838 968 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 GBP2P32456 591 aaPredicted RBP16.61■□□□□ 0.25
HPS1-202ENST00000338546 GRIA1P42261 906 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 HNRNPDQ14103 355 aaKnown RBP16.61■□□□□ 0.25
HPS1-202ENST00000338546 TAF12Q16514 161 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 PARP15Q460N3 678 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 FAM117BQ6P1L5 589 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 ITIH5Q86UX2 942 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 GORASP1Q9BQQ3 440 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 CEP41Q9BYV8 373 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 PLAC1Q9HBJ0 212 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 KCNK9Q9NPC2 374 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 MPP6Q9NZW5 540 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 IPO11Q9UI26 975 aaKnown RBP16.61■□□□□ 0.25
HPS1-202ENST00000338546 ASB3Q9Y575 518 aa16.61■□□□□ 0.25
HPS1-202ENST00000338546 KIAA0100Q14667 2235 aaKnown RBP16.61■□□□□ 0.25
HPS1-202ENST00000338546 NDUFAB1O14561 156 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 GJB5O95377 273 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 FGBP02675 491 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 CNTFP26441 200 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 SLC11A2P49281 568 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 HARS2P49590 506 aaKnown RBP16.6■□□□□ 0.25
HPS1-202ENST00000338546 SERPINB9P50453 376 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 PAPOLAP51003 745 aaKnown RBP16.6■□□□□ 0.25
HPS1-202ENST00000338546 RENBPP51606 427 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 EPHB3P54753 998 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 CCDC117Q8IWD4 279 aaPredicted RBP16.6■□□□□ 0.25
HPS1-202ENST00000338546 CNTD1Q8N815 330 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 MZB1Q8WU39 189 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 DEPDC1BQ8WUY9 529 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 MTBPQ96DY7 904 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 CCT8L2Q96SF2 557 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 NACA2Q9H009 215 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 NOL6Q9H6R4 1146 aaKnown RBP16.6■□□□□ 0.25
HPS1-202ENST00000338546 GLOD4Q9HC38 313 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 PPANQ9NQ55 473 aaKnown RBP16.6■□□□□ 0.25
HPS1-202ENST00000338546 ZNF212Q9UDV6 495 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 ACSL4O60488 711 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 KRT37O76014 449 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 POLBP06746 335 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 ACRP10323 421 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 CTSAP10619 480 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 TACR2P21452 398 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 LBX1P52954 281 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 MTM1Q13496 603 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 PABPC1LQ4VXU2 614 aaKnown RBP16.6■□□□□ 0.25
HPS1-202ENST00000338546 SPANXN3Q5MJ09 141 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 TTC39BQ5VTQ0 682 aaPredicted RBP16.6■□□□□ 0.25
HPS1-202ENST00000338546 RAP1GAP2Q684P5 730 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 CHSY1Q86X52 802 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 SPATS2Q86XZ4 545 aaKnown RBP16.6■□□□□ 0.25
HPS1-202ENST00000338546 FIBCD1Q8N539 461 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 ARNTL2Q8WYA1 636 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 CDKL2Q92772 493 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 CLP1Q92989 425 aaKnown RBP16.6■□□□□ 0.25
HPS1-202ENST00000338546 PSMG2Q969U7 264 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 CHMP6Q96FZ7 201 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 MLPHQ9BV36 600 aaPredicted RBP16.6■□□□□ 0.25
HPS1-202ENST00000338546 ZBP1Q9H171 429 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 NDFIP2Q9NV92 336 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 INSL6Q9Y581 213 aa16.6■□□□□ 0.25
HPS1-202ENST00000338546 SHROOM3Q8TF72 1996 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 F5H5T6 163 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 PRRG1O14668 218 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 LATS1O95835 1130 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 CREB1P16220 341 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 MGAT1P26572 445 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 GEMP55040 296 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 SESN2P58004 480 aaPredicted RBP16.59■□□□□ 0.25
HPS1-202ENST00000338546 CDH17Q12864 832 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 EFTUD2Q15029 972 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■■■■■ 54
HPS1-202ENST00000338546 ARHGAP36Q6ZRI8 547 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 UBE2Q1Q7Z7E8 422 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 MPP5Q8N3R9 675 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 NSMCE1Q8WV22 266 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 IGSF8Q969P0 613 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 RPRD1AQ96P16 312 aaPredicted RBP16.59■□□□□ 0.25
HPS1-202ENST00000338546 DDX50Q9BQ39 737 aaKnown RBP16.59■□□□□ 0.25
HPS1-202ENST00000338546 IL22Q9GZX6 179 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 RBM22Q9NW64 420 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■■■□□ 17.4
HPS1-202ENST00000338546 SAMD15Q9P1V8 674 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 PRKAG2Q9UGJ0 569 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 GGA2Q9UJY4 613 aa16.59■□□□□ 0.25
HPS1-202ENST00000338546 ERICH4A6NGS2 130 aa16.58■□□□□ 0.24
HPS1-202ENST00000338546 COCHO43405 550 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms