RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 MFSD5Q6N075 450 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ARPINQ7Z6K5 226 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ZCCHC7Q8N3Z6 543 aaKnown RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 SENP8Q96LD8 212 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ATP13A1Q9HD20 1204 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 VTA1Q9NP79 307 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 R3HDM2Q9Y2K5 976 aaKnown RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 HDAC3O15379 428 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 AVILO75366 819 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 AXLP30530 894 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 SLC16A1P53985 500 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 CCDC15Q0P6D6 951 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ILF2Q12905 390 aaKnown RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 RETSATQ6NUM9 610 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 PIGZQ86VD9 579 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 MTERF3Q96E29 417 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ACE2Q9BYF1 805 aaPredicted RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 ELOVL4Q9GZR5 314 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 SNCAIPQ9Y6H5 919 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 BTN3A1O00481 513 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 RPLP2P05387 115 aaKnown RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 COX4I1P13073 169 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ZNF7P17097 686 aaPredicted RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 MMP8P22894 467 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 CHI3L1P36222 383 aaPredicted RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 RTP1P59025 263 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 KRR1Q13601 381 aaKnown RBP13.98□□□□□ -0.17
RTN4-202ENST00000337526 ZNF284Q2VY69 593 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 NECAB2Q7Z6G3 386 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 TTC7BQ86TV6 843 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ZDHHC13Q8IUH4 622 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 EID3Q8N140 333 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 PGLYRP2Q96PD5 576 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 ZNF670Q9BS34 389 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 PCDHB5Q9Y5E4 795 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 PCDHA11Q9Y5I1 949 aa13.98□□□□□ -0.17
RTN4-202ENST00000337526 DCDC2CA8MYV0 355 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 AGPSO00116 658 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 RAD51BO15315 384 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 PPP1R11O60927 126 aaPredicted RBP13.97□□□□□ -0.17
RTN4-202ENST00000337526 LGALS2P05162 132 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 ITGA2BP08514 1039 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 PTPN1P18031 435 aaKnown RBP13.97□□□□□ -0.17
RTN4-202ENST00000337526 ACO2Q99798 780 aaKnown RBP13.97□□□□□ -0.17
RTN4-202ENST00000337526 KRT84Q9NSB2 600 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 RGSL1A5PLK6 1076 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 ZNF862O60290 1169 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 SEC22BO75396 215 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 MAFO75444 373 aaPredicted RBP13.97□□□□□ -0.17
RTN4-202ENST00000337526 ATP6V1C1P21283 382 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 SERPINH1P50454 418 aaKnown RBP13.97□□□□□ -0.17
RTN4-202ENST00000337526 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 MAD2L1Q13257 205 aaPredicted RBP13.97□□□□□ -0.17
RTN4-202ENST00000337526 CAMK1DQ8IU85 385 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 LRRC57Q8N9N7 239 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 UTP15Q8TED0 518 aaKnown RBP13.97□□□□□ -0.17
RTN4-202ENST00000337526 LRRN4Q8WUT4 740 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 GAD1Q99259 594 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 LGMNQ99538 433 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 FAM50BQ9Y247 325 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 TCRBV7S2A1N4TA0A589 114 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 SNTNA6NMZ2 147 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 IFNA14P01570 189 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 ALDH2P05091 517 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 GSNP06396 782 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 CCDC166P0CW27 439 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 ANPEPP15144 967 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 CAMK2GQ13555 558 aaPredicted RBP13.97□□□□□ -0.17
RTN4-202ENST00000337526 UGCGQ16739 394 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 MILR1Q7Z6M3 343 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 DHDDSQ86SQ9 333 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 PALB2Q86YC2 1186 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 TNS4Q8IZW8 715 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 FBXW8Q8N3Y1 598 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 SPPL2AQ8TCT8 520 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 MAGED4Q96JG8 741 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 PHACTR1Q9C0D0 580 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 CYLDQ9NQC7 956 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 SYBUQ9NX95 663 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 SLC17A7Q9P2U7 560 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 CPA4Q9UI42 421 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 PLA2G4CQ9UP65 541 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 HES2Q9Y543 173 aa13.97□□□□□ -0.17
RTN4-202ENST00000337526 LYPLA2O95372 231 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 SERPINA6P08185 405 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 ADORA2AP29274 412 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 TMEM132BQ14DG7 1078 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 TRPC4APQ8TEL6 797 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 BTN2A2Q8WVV5 523 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 MECRQ9BV79 373 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 EMILIN2Q9BXX0 1053 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 UGT2B28Q9BY64 529 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 ALG9Q9H6U8 611 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 SH3BP4Q9P0V3 963 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 ZMYM2Q9UBW7 1377 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 KRT87PA6NCN2 255 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 STK25O00506 426 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 ATG7O95352 703 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 PGM3O95394 542 aa13.96□□□□□ -0.17
RTN4-202ENST00000337526 SNHG28P0DPA3 235 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms