RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 C15orf38-AP3S2A0A0A6YYH1 394 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 HOXA11P31270 313 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-201ENST00000261693 GLRBP48167 497 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 PKNOX1P55347 436 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 MRPS22P82650 360 aaKnown RBP19.74■□□□□ 0.75
SCARB1-201ENST00000261693 GRM2Q14416 872 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 MAP3K21Q5TCX8 1036 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 TMEM198Q66K66 360 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 TMC7Q7Z402 723 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 ARPINQ7Z6K5 226 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 DEFB132Q7Z7B7 95 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 BEST2Q8NFU1 509 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 USP13Q92995 863 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-201ENST00000261693 NUF2Q9BZD4 464 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 SNX25Q9H3E2 840 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 NXF3Q9H4D5 531 aaKnown RBP19.74■□□□□ 0.75
SCARB1-201ENST00000261693 GOLGA2P5Q9HBQ8 144 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 IARS2Q9NSE4 1012 aaKnown RBP19.74■□□□□ 0.75
SCARB1-201ENST00000261693 GPRC5DQ9NZD1 345 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 UBP1Q9NZI7 540 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 BFARQ9NZS9 450 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 SLC39A10Q9ULF5 831 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 CASQ2O14958 399 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-201ENST00000261693 BEST1O76090 585 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 GLDCP23378 1020 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 PTPN3P26045 913 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 THOP1P52888 689 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 XIAPP98170 497 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 ARMCX2Q7L311 632 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 SDCCAG8Q86SQ7 713 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-201ENST00000261693 DCUN1D1Q96GG9 259 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 ILKAPQ9H0C8 392 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-201ENST00000261693 FAM49AQ9H0Q0 323 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-201ENST00000261693 C20orf96Q9NUD7 363 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-201ENST00000261693 PIGVQ9NUD9 493 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 CLIC5Q9NZA1 410 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 IGSF9Q9P2J2 1179 aa19.74■□□□□ 0.75
SCARB1-201ENST00000261693 KPNA7A9QM74 516 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 SPATA31D3P0C874 917 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 PABPC4LP0CB38 370 aaKnown RBP19.73■□□□□ 0.75
SCARB1-201ENST00000261693 PRDX6P30041 224 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 LSM12Q3MHD2 195 aaKnown RBP19.73■□□□□ 0.75
SCARB1-201ENST00000261693 OGFRL1Q5TC84 451 aaPredicted RBP19.73■□□□□ 0.75
SCARB1-201ENST00000261693 SPATA31D4Q6ZUB0 917 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 PSTKQ8IV42 348 aaKnown RBP19.73■□□□□ 0.75
SCARB1-201ENST00000261693 SULF1Q8IWU6 871 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 DSELQ8IZU8 1212 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 PQLC1Q8N2U9 271 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 NAT14Q8WUY8 206 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 TASP1Q9H6P5 420 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 RCOR3Q9P2K3 495 aaPredicted RBP19.73■□□□□ 0.75
SCARB1-201ENST00000261693 ADAM28Q9UKQ2 775 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 ZBTB24O43167 697 aaPredicted RBP19.73■□□□□ 0.75
SCARB1-201ENST00000261693 AVPR1AP37288 418 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 ACADSBP45954 432 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 ZBTB6Q15916 424 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 FBXO47Q5MNV8 452 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 POTEAQ6S8J7 498 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 HFE2Q6ZVN8 426 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 CLEC14AQ86T13 490 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 RNF169Q8NCN4 708 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 NCSTNQ92542 709 aa19.73■□□□□ 0.75
SCARB1-201ENST00000261693 NMD3Q96D46 503 aaKnown RBP19.73■□□□□ 0.75
SCARB1-201ENST00000261693 ANKRD33BA6NCL7 494 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 TMEM114B3SHH9 223 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 FBXO21O94952 628 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 XRCC1P18887 633 aaPredicted RBP19.72■□□□□ 0.75
SCARB1-201ENST00000261693 MPP3Q13368 585 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 DYNC1I2Q13409 638 aaKnown RBP19.72■□□□□ 0.75
SCARB1-201ENST00000261693 NXNQ6DKJ4 435 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 MOB2Q70IA6 237 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 TMEM135Q86UB9 458 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 KCNMB4Q86W47 210 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 LRRC52Q8N7C0 313 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 KYQ8NBH2 561 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 ISL2Q96A47 359 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 RCN3Q96D15 328 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 CATSPER2Q96P56 530 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 UNKQ9C0B0 810 aaKnown RBP19.72■□□□□ 0.75
SCARB1-201ENST00000261693 CDHR5Q9HBB8 845 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 STK39Q9UEW8 545 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 PSMD13Q9UNM6 376 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 CENPFP49454 3210 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 A0A0G2JLL6 359 aaPredicted RBP19.72■□□□□ 0.75
SCARB1-201ENST00000261693 STX16-NPEPL1H3BU86 382 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 PHGDHO43175 533 aaKnown RBP19.72■□□□□ 0.75
SCARB1-201ENST00000261693 AP2A1O95782 977 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 MPOP05164 745 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 JUNP05412 331 aaKnown RBP19.72■□□□□ 0.75
SCARB1-201ENST00000261693 THRAP10827 490 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 ERCC2P18074 760 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 ACAT1P24752 427 aaKnown RBP19.72■□□□□ 0.75
SCARB1-201ENST00000261693 PMLP29590 882 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 GRIA4P48058 902 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 RPS6KA3P51812 740 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 LAMC2Q13753 1193 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 DPYSQ14117 519 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 FLOT2Q14254 428 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 MARCH8Q5T0T0 291 aa19.72■□□□□ 0.75
SCARB1-201ENST00000261693 CATSPER4Q7RTX7 472 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms