RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 ASNSP08243 561 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 TFE3P19532 575 aaPredicted RBP9.44□□□□□ -0.9
SRSF6-201ENST00000244020 NFKBIAP25963 317 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 CLK1P49759 484 aaKnown RBP9.44□□□□□ -0.9
SRSF6-201ENST00000244020 MS4A2Q01362 244 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 KIF19Q2TAC6 998 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 KCNT2Q6UVM3 1135 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 EPGNQ6UW88 154 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 TIFABQ6ZNK6 161 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 NPAS2Q99743 824 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 CIB1Q99828 191 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 BBS2Q9BXC9 721 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 MRPL4Q9BYD3 311 aaKnown RBP9.44□□□□□ -0.9
SRSF6-201ENST00000244020 TASP1Q9H6P5 420 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 ZNF302Q9NR11 478 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 PCDHB12Q9Y5F1 795 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 PSAT1Q9Y617 370 aa9.44□□□□□ -0.9
SRSF6-201ENST00000244020 A0A096LPK6 155 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 A0A1B0GTW7 788 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 ZNF23P17027 643 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 SPRP35270 261 aaPredicted RBP9.43□□□□□ -0.9
SRSF6-201ENST00000244020 SLC5A3P53794 718 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 PTPN11Q06124 597 aaPredicted RBP9.43□□□□□ -0.9
SRSF6-201ENST00000244020 SURF1Q15526 300 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 CARTPTQ16568 116 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 STXBP5Q5T5C0 1151 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 IL23RQ5VWK5 629 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 LAYNQ6UX15 382 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 STRA8Q7Z7C7 330 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 HACE1Q8IYU2 909 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 MOCOSQ96EN8 888 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 AGAP3Q96P47 875 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 OSBPL11Q9BXB4 747 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 RBM38Q9H0Z9 239 aaKnown RBP9.43□□□□□ -0.9
SRSF6-201ENST00000244020 LHX5Q9H2C1 402 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 PCDH18Q9HCL0 1135 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 SNX15Q9NRS6 342 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 CYP2F1P24903 491 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 MPSTP25325 297 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 HMOX2P30519 316 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 GP5P40197 560 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 LSM12Q3MHD2 195 aaKnown RBP9.43□□□□□ -0.9
SRSF6-201ENST00000244020 TMEM198Q66K66 360 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 CCDC81Q6ZN84 652 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 LILRA2Q8N149 483 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 FAM47BQ8NA70 645 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 MRIQ9BWK5 157 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 PNPLA3Q9NST1 481 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 RNF146Q9NTX7 359 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 CLEC11AQ9Y240 323 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 SH3PXD2BA1X283 911 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 BCLAF3A2AJT9 711 aaKnown RBP9.43□□□□□ -0.9
SRSF6-201ENST00000244020 HDAC3O15379 428 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 S100A5P33763 92 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 PPARGP37231 505 aaPredicted RBP9.43□□□□□ -0.9
SRSF6-201ENST00000244020 GLRBP48167 497 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 GBE1Q04446 702 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 CEACAM7Q14002 265 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 ANKRD23Q86SG2 305 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 ZBTB8OSQ8IWT0 167 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 PCDH19Q8TAB3 1148 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 MAPK15Q8TD08 544 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 LRTOMTQ8WZ04 291 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 CITED4Q96RK1 184 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 CLK4Q9HAZ1 481 aaKnown RBP9.43□□□□□ -0.9
SRSF6-201ENST00000244020 EXOSC4Q9NPD3 245 aaKnown RBP9.43□□□□□ -0.9
SRSF6-201ENST00000244020 RIMS3Q9UJD0 308 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 FBXO9Q9UK97 447 aaPredicted RBP9.43□□□□□ -0.9
SRSF6-201ENST00000244020 PCDHGA3Q9Y5H0 932 aa9.43□□□□□ -0.9
SRSF6-201ENST00000244020 INO80B-WBP1J3KQ70 363 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 NPM3O75607 178 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 RNASEH2AO75792 299 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 PIGNO95427 931 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 F7P08709 466 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 CDH5P33151 784 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 HARS2P49590 506 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 RPL14P50914 215 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 IFRD2Q12894 506 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 TAZQ16635 292 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 BORAQ6PGQ7 559 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 PGAM4Q8N0Y7 254 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 BBS5Q8N3I7 341 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 COLGALT1Q8NBJ5 622 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 KBTBD7Q8WVZ9 684 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 EXT2Q93063 718 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 RNF34Q969K3 372 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 ZNF669Q96BR6 464 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 ZNF512Q96ME7 567 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 INO80BQ9C086 356 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 TMEM39BQ9GZU3 492 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 PORCNQ9H237 461 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 NOL11Q9H8H0 719 aaKnown RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 CAB39LQ9H9S4 337 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 NMRAL1Q9HBL8 299 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 FAIMQ9NVQ4 179 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 TUBA8Q9NY65 449 aaPredicted RBP9.42□□□□□ -0.9
SRSF6-201ENST00000244020 SQORQ9Y6N5 450 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 TRIM43BA6NCK2 446 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 RHOBTB1O94844 696 aa9.42□□□□□ -0.9
SRSF6-201ENST00000244020 CHRNGP07510 517 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms