RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ACSL4O60488 711 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 KLKB1P03952 638 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TACR2P21452 398 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GRIA1P42261 906 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CORO7P57737 925 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GPX6P59796 221 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 IFI35P80217 286 aaPredicted RBP20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CROCCP2Q86T23 111 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 IGDCC3Q8IVU1 814 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 KREMEN2Q8NCW0 462 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ZNF419Q96HQ0 510 aaPredicted RBP20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GORASP1Q9BQQ3 440 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 EMILIN2Q9BXX0 1053 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CHMP2BQ9UQN3 213 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 RWDD3Q9Y3V2 267 aa20.14■□□□□ 0.81
TNFRSF1A-201ENST00000162749 A0A087WUV0 522 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 LRG1P02750 347 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 SSTR1P30872 391 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 SLC6A4P31645 630 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CD68P34810 354 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ELK3P41970 407 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CCDC38Q502W7 563 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 C6orf118Q5T5N4 469 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CCDC149Q6ZUS6 474 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CIR1Q86X95 450 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 DENND1CQ8IV53 801 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MDM1Q8TC05 714 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TEKT5Q96M29 485 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 SLC22A12Q96S37 553 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 VPS37BQ9H9H4 285 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 EIF2B3Q9NR50 452 aaKnown RBP20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 DONSONQ9NYP3 566 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TRHDEQ9UKU6 1024 aa20.13■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TCEA3O75764 348 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 FAM107AO95990 144 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GLUD1P00367 558 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 JCHAINP01591 159 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 PAPOLAP51003 745 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 NDST2P52849 883 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CDK16Q00536 496 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TNFAIP8L3Q5GJ75 292 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 C9orf50Q5SZB4 431 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GAREM2Q75VX8 874 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ATP11CQ8NB49 1132 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CYP2S1Q96SQ9 504 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 KLF16Q9BXK1 252 aaPredicted RBP20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MIA3Q5JRA6 1907 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 REV3LO60673 3130 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 C5orf67F2Z3F1 127 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 F5H5T6 163 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CCNB1P14635 433 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 SLC11A2P49281 568 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CAMK1Q14012 370 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 STAT4Q14765 748 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 C5orf22Q49AR2 442 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 PABPC1LQ4VXU2 614 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 FAM109BQ6ICB4 259 aaPredicted RBP20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 RFWD3Q6PCD5 774 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 LRRC49Q8IUZ0 686 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CNTD1Q8N815 330 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ZFRQ96KR1 1074 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 LRRC3Q9BY71 257 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GBA3Q9H227 469 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 FAM169AQ9Y6X4 670 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 C5orf42Q9H799 3197 aa20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 HELZP42694 1942 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GRXCR1A8MXD5 290 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 RGS16O15492 202 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 OLFM2O95897 454 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GABRR2P28476 465 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CORO1AP31146 461 aaKnown RBP20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 UBE3AQ05086 875 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TXNDC8Q6A555 127 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TMC8Q8IU68 726 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 C10orf67Q8IYJ2 551 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 LGI2Q8N0V4 545 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 WBP2Q969T9 261 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 AZIN2Q96A70 460 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 XAB2Q9HCS7 855 aaKnown RBP20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TRPC7Q9HCX4 862 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ATG2AQ2TAZ0 1938 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 NOTCH4Q99466 2003 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 GMNCA6NCL1 334 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MATN3O15232 486 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 IRF1P10914 325 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 NFKB1P19838 968 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MMP13P45452 471 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CLCN4P51793 760 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 C3orf62Q6ZUJ4 267 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 PALM2Q8IXS6 379 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 HS6ST3Q8IZP7 471 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 HMCESQ96FZ2 354 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 SMPD4Q9NXE4 827 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 CTNNAL1Q9UBT7 734 aa20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 IPO11Q9UI26 975 aaKnown RBP20.11■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ARHGAP42A6NI28 874 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 MBL2P11226 248 aaPredicted RBP20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 IRS1P35568 1242 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 ITPRIPL1Q6GPH6 555 aa20.1■□□□□ 0.81
TNFRSF1A-201ENST00000162749 TIGD7Q6NT04 549 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms