RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 TPP1O14773 563 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 KPNA2P52292 529 aaKnown RBP12.31□□□□□ -0.44
CHPF2-201ENST00000035307 MRPS5P82675 430 aaKnown RBP12.31□□□□□ -0.44
CHPF2-201ENST00000035307 OLIG2Q13516 323 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 KPNB1Q14974 876 aaKnown RBP12.31□□□□□ -0.44
CHPF2-201ENST00000035307 NFE2Q16621 373 aaPredicted RBP12.31□□□□□ -0.44
CHPF2-201ENST00000035307 ZDHHC14Q8IZN3 488 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 EIF1ADQ8N9N8 165 aaKnown RBP12.31□□□□□ -0.44
CHPF2-201ENST00000035307 APOPT1Q96IL0 206 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 KLHL5Q96PQ7 755 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 TBC1D10AQ9BXI6 508 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 ZNF395Q9H8N7 513 aaPredicted RBP12.31□□□□□ -0.44
CHPF2-201ENST00000035307 GMIPQ9P107 970 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 CCDC85CA6NKD9 419 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 ERCC2P18074 760 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 FOXN2P32314 431 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 PTPN7P35236 360 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 GRIK3Q13003 919 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 C6orf10Q5SRN2 563 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 TRMT10BQ6PF06 316 aaKnown RBP12.31□□□□□ -0.44
CHPF2-201ENST00000035307 UNC93AQ86WB7 457 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 CARNMT1Q8N4J0 409 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 PLA2G4CQ9UP65 541 aa12.31□□□□□ -0.44
CHPF2-201ENST00000035307 A0A0U1RQF3 1178 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 TTC24A2A3L6 582 aaPredicted RBP12.3□□□□□ -0.44
CHPF2-201ENST00000035307 ERI2A8K979 691 aaKnown RBP12.3□□□□□ -0.44
CHPF2-201ENST00000035307 CCL22O00626 93 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 DDHD2O94830 711 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 S100BP04271 92 aaPredicted RBP12.3□□□□□ -0.44
CHPF2-201ENST00000035307 SLC5A3P53794 718 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 SLC25A3Q00325 362 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 PPM1JQ5JR12 505 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 PLPP4Q5VZY2 271 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 NT5DC4Q86YG4 428 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 AZIN2Q96A70 460 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 CATSPER2Q96P56 530 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 MARCH2Q9P0N8 246 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 PRR23AA6NEV1 266 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 TOP3BO95985 862 aaKnown RBP12.3□□□□□ -0.44
CHPF2-201ENST00000035307 TBX4P57082 545 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 UBAP2LQ14157 1087 aaKnown RBP12.3□□□□□ -0.44
CHPF2-201ENST00000035307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■■■■□ 23.7
CHPF2-201ENST00000035307 DEFB107AQ8IZN7 70 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHPF2-201ENST00000035307 OR6K2Q8NGY2 324 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 LRRC40Q9H9A6 602 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 CRTAC1Q9NQ79 661 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 CRYL1Q9Y2S2 319 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 LRG1P02750 347 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 ITGAVP06756 1048 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 TM4SF4P48230 202 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 COPAP53621 1224 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 NCALDP61601 193 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 MAPRE1Q15691 268 aaKnown RBP12.3□□□□□ -0.44
CHPF2-201ENST00000035307 ZNF470Q6ECI4 717 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 NAPEPLDQ6IQ20 393 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 C15orf39Q6ZRI6 1047 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 TTC30BQ8N4P2 665 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 PLD5Q8N7P1 536 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 DDI1Q8WTU0 396 aa12.3□□□□□ -0.44
CHPF2-201ENST00000035307 ITGB6P18564 788 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 CYP3A5P20815 502 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 CCR1P32246 355 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 HARS2P49590 506 aaKnown RBP12.29□□□□□ -0.44
CHPF2-201ENST00000035307 NAGLUP54802 743 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 MGAT5Q09328 741 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 USP4Q13107 963 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 CTBP1Q13363 440 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 PDAP1Q13442 181 aaKnown RBP12.29□□□□□ -0.44
CHPF2-201ENST00000035307 PEX6Q13608 980 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 FUT10Q6P4F1 479 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 DCLRE1AQ6PJP8 1040 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 UNC5AQ6ZN44 842 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 CLEC20AQ6ZU45 233 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 GPRIN1Q7Z2K8 1008 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 TTC7BQ86TV6 843 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 OXNAD1Q96HP4 312 aaPredicted RBP12.29□□□□□ -0.44
CHPF2-201ENST00000035307 CLPTM1LQ96KA5 538 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 CORO1BQ9BR76 489 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 GPR62Q9BZJ7 368 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 KANSL3Q9P2N6 904 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 ADAM28Q9UKQ2 775 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 H0Y626 953 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 PFDN6O15212 129 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 ALOX15BO15296 676 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 NFKB1P19838 968 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 PKNOX1P55347 436 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 KLC1Q07866 573 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 SLC45A4Q5BKX6 768 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 DENND1CQ8IV53 801 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 LGI2Q8N0V4 545 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 CNPY4Q8N129 248 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 TRIML2Q8N7C3 387 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 PYDC1Q8WXC3 89 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 NCLNQ969V3 563 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 NDNQ99608 321 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 KATNBL1Q9H079 304 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 Q9H521 79 aa12.29□□□□□ -0.44
CHPF2-201ENST00000035307 ACSS3Q9H6R3 686 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms