RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 HBS1LQ9Y450 684 aaKnown RBP6.18□□□□□ -1.42
VPS13D-201ENST00000011700 GRIN2DO15399 1336 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 CEP290O15078 2479 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 VDRP11473 427 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 ITIH1P19827 911 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 DGKAP23743 735 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 TMBIM6P55061 237 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 PAMR1Q6UXH9 720 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 TMPRSS11AQ6ZMR5 421 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 AGMOQ6ZNB7 445 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 LHFPL3Q86UP9 236 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 FSTL5Q8N475 847 aaPredicted RBP6.18□□□□□ -1.42
VPS13D-201ENST00000011700 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.18□□□□□ -1.42
VPS13D-201ENST00000011700 SMYD1Q8NB12 490 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 EEF1AKMT1Q8WVE0 214 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 DOPEY2Q9Y3R5 2298 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 DOCK9Q9BZ29 2069 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 ECE2O60344 883 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 UGT2B11O75310 529 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 CHN2P52757 468 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 IL2P60568 153 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 RPS7P62081 194 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 ALDH6A1Q02252 535 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 FBXO43Q4G163 708 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 TBC1D21Q8IYX1 336 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 PIWIL2Q8TC59 973 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 NR4A3Q92570 626 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 MIEF2Q96C03 454 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 SMARCD1Q96GM5 515 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 PPP3R2Q96LZ3 170 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 LRRC1Q9BTT6 524 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 EMC3Q9P0I2 261 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 NFAT5O94916 1531 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 CHD5Q8TDI0 1954 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 CEMIPQ8WUJ3 1361 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 H7C1W4 665 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 LRG1P02750 347 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 CYP1A2P05177 515 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 EIF4BP23588 611 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 NTSP30990 170 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 SULT2A1Q06520 285 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 IZUMO1Q8IYV9 350 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 STK32AQ8WU08 396 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 HEMGNQ9BXL5 484 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 C6orf62Q9GZU0 229 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 CDH19Q9H159 772 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 C14orf105Q9NVL8 296 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 JAG2Q9Y219 1238 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 VWDEQ8N2E2 1590 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 F5H6K3 240 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 SERPINA6P08185 405 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 BMP7P18075 431 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 MRPS22P82650 360 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 KLRC3Q07444 240 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 SQLEQ14534 574 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 PPM1LQ5SGD2 360 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 EIF3MQ7L2H7 374 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 ZNF589Q86UQ0 364 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 IL17REQ8NFR9 667 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 RBM4BQ9BQ04 359 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 RBM4Q9BWF3 364 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 NOL11Q9H8H0 719 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 RNPEPL1Q9HAU8 725 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 SSR3Q9UNL2 185 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 COQ6Q9Y2Z9 468 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 PCDHGB2Q9Y5G2 931 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 LAMB1P07942 1786 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 SPTBN2O15020 2390 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 LOC110117498-PIK3R3F6TDL0 507 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 BTN3A3O00478 584 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 PARNO95453 639 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 COX7A2P14406 83 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 ADSSP30520 456 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 RPL9P32969 192 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 HSF2Q03933 536 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 QPRTQ15274 297 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 OASLQ15646 514 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 NFIL3Q16649 462 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 RPTNQ6XPR3 784 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 PIK3R3Q92569 461 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 C2orf49Q9BVC5 232 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 SIK2Q9H0K1 926 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 CD320Q9NPF0 282 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 RASSF1Q9NS23 344 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 DNAJB4Q9UDY4 337 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 PCDHGA4Q9Y5G9 962 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 ZNF335Q9H4Z2 1342 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 APOC4-APOC2K7ER74 178 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 GH2P01242 217 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 APOC2P02655 101 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 ATP6V1B2P21281 511 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 FLT3P36888 993 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 BIKQ13323 160 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 ANXA8L1Q5VT79 327 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 BNIPLQ7Z465 357 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 PSTKQ8IV42 348 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 ITFG1Q8TB96 612 aa6.17□□□□□ -1.42
VPS13D-201ENST00000011700 PHF10Q8WUB8 498 aaKnown RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 ZNF669Q96BR6 464 aaPredicted RBP6.17□□□□□ -1.42
VPS13D-201ENST00000011700 ERMAPQ96PL5 475 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms