RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 DLDP09622 509 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 EEF2P13639 858 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 PCSK2P16519 638 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ENGP17813 658 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 PLCG1P19174 1290 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 PDCP20941 246 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 CHATP28329 748 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 TYK2P29597 1187 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 PCGF2P35227 344 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 MAP2K2P36507 400 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 CASRP41180 1078 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ECE1P42892 770 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SLC6A12P48065 614 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 MECP2P51608 486 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 HNRNPMP52272 730 aaKnown RBP eCLIP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SLC12A3P55017 1021 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 VCPP55072 806 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 NRG3P56975 720 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 CTXN1P60606 82 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 YPEL5P62699 121 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 RPL11P62913 178 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 TGM3Q08188 693 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 DMWDQ09019 674 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 RAD51AP2Q09MP3 1159 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 PTP4A2Q12974 167 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 DYRK1AQ13627 763 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 AAMPQ13685 434 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 BOP1Q14137 746 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 GPR18Q14330 331 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 RNPS1Q15287 305 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SEC23BQ15437 767 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 TBCCQ15814 346 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 IGFBP7Q16270 282 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 CDKN3Q16667 212 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SYT16Q17RD7 645 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF630Q2M218 657 aaPredicted RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ZSCAN23Q3MJ62 389 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 TUBB8Q3ZCM7 444 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 GXYLT1Q4G148 440 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF789Q5FWF6 425 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF667Q5HYK9 610 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 RRP12Q5JTH9 1297 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 DNTTIP2Q5QJE6 756 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 FAM69BQ5VUD6 431 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SFMBT2Q5VUG0 894 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 KIAA0319Q5VV43 1072 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 MYSM1Q5VVJ2 828 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 RAET1LQ5VY80 246 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 RNLSQ5VYX0 342 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 MBLAC2Q68D91 279 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ANKS6Q68DC2 871 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 TXNRD3NBQ6F5E7 133 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF770Q6IQ21 691 aaPredicted RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 HMBOX1Q6NT76 420 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SHISA6Q6ZSJ9 500 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 FAM57BQ71RH2 274 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 MDGA2Q7Z553 956 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 NOP9Q86U38 636 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SLC25A42Q86VD7 318 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 MEX3DQ86XN8 651 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 PTOV1Q86YD1 416 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 NT5DC4Q86YG4 428 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 PLEKHM2Q8IWE5 1019 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 TRMT2AQ8IZ69 625 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ARHGEF39Q8N4T4 335 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 METTL27Q8N6F8 245 aaPredicted RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 TERB1Q8NA31 727 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 NEXN-AS1Q8NBZ9 246 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 EXD1Q8NHP7 514 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 RNF128Q8TEB7 428 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 TMEM174Q8WUU8 243 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ITLN1Q8WWA0 313 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 CPT1BQ92523 772 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SEMA4DQ92854 862 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 FKBP10Q96AY3 582 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 TMEM159Q96B96 161 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 FUBP3Q96I24 572 aaKnown RBP eCLIP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SPATA17Q96L03 361 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 LINC00477Q96M19 166 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SNX18Q96RF0 628 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 GAL3ST4Q96RP7 486 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SYT15Q9BQS2 421 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 RIOK1Q9BRS2 568 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 OSBPL11Q9BXB4 747 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 BACH2Q9BYV9 841 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 OR10A5Q9H207 317 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 GNB4Q9HAV0 340 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ADGRL4Q9HBW9 690 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 KRCC1Q9NPI7 259 aaPredicted RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF331Q9NQX6 463 aaPredicted RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ASH1LQ9NR48 2969 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 INTS7Q9NVH2 962 aaKnown RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 FAM118AQ9NWS6 357 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 C2orf42Q9NWW7 574 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF224Q9NZL3 707 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF624Q9P2J8 865 aaPredicted RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 SAE1Q9UBE0 346 aaPredicted RBP-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 DKK3Q9UBP4 350 aa-0.93□□□□□ -2.56
CDKL5-210ENST00000636046 RNF14Q9UBS8 474 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms