RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ABL2P42684 1182 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 RPL21P46778 160 aaKnown RBP9.42□□□□□ -0.9
GGA3-223ENST00000621870 GRB14Q14449 540 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 INSCQ1MX18 579 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 SLC45A4Q5BKX6 768 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 AGBL2Q5U5Z8 902 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 PPP2R2DQ66LE6 453 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 LCLAT1Q6UWP7 414 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 PHF13Q86YI8 300 aaPredicted RBP9.42□□□□□ -0.9
GGA3-223ENST00000621870 DAW1Q8N136 415 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 ZNF614Q8N883 585 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 PCYOX1LQ8NBM8 494 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 FBXO22Q8NEZ5 403 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 AUTS2Q8WXX7 1259 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 MED8Q96G25 268 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 C1QTNF7Q9BXJ2 289 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 FAM129AQ9BZQ8 928 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 ARHGAP39Q9C0H5 1083 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 MAF1Q9H063 256 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 ELOVL6Q9H5J4 265 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 MINDY3Q9H8M7 445 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 C6orf203Q9P0P8 240 aaPredicted RBP9.42□□□□□ -0.9
GGA3-223ENST00000621870 CDYLQ9Y232 598 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 USP15Q9Y4E8 981 aaPredicted RBP9.42□□□□□ -0.9
GGA3-223ENST00000621870 KNDC1Q76NI1 1749 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 GNG14A0A1W2PPG7 69 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 EVPLLA8MZ36 301 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 SERPINH1P50454 418 aaKnown RBP9.42□□□□□ -0.9
GGA3-223ENST00000621870 ESRRGP62508 458 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 FPGSQ05932 587 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 DPYSL3Q14195 570 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 INTS6LQ5JSJ4 861 aaKnown RBP9.42□□□□□ -0.9
GGA3-223ENST00000621870 OTUB1Q96FW1 271 aaPredicted RBP9.42□□□□□ -0.9
GGA3-223ENST00000621870 PCED1BQ96HM7 432 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 ST6GALNAC4Q9H4F1 302 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 ASB8Q9H765 288 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.42□□□□□ -0.9
GGA3-223ENST00000621870 DYRK1BQ9Y463 629 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 A0A0A0MRY4 1105 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 C1QTNF3-AMACRE9PGA6 284 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 PAGE1O75459 146 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 EOMESO95936 686 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 C1RP00736 705 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 LMNAP02545 664 aaKnown RBP9.42□□□□□ -0.9
GGA3-223ENST00000621870 RBP1P09455 135 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 CYP2A6P11509 494 aaPredicted RBP9.42□□□□□ -0.9
GGA3-223ENST00000621870 ATP4AP20648 1035 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 RFWD3Q6PCD5 774 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 ECHDC2Q86YB7 292 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 KREMEN2Q8NCW0 462 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 PPP1R16AQ96I34 528 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 SPATA13Q96N96 652 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 KCNK16Q96T55 309 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 ACOX2Q99424 681 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 ANLNQ9NQW6 1124 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 CACNA2D2Q9NY47 1150 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.42□□□□□ -0.91e-6■■■■□ 21.4
GGA3-223ENST00000621870 CTNNAL1Q9UBT7 734 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 PCDHGC5Q9Y5F6 944 aa9.42□□□□□ -0.9
GGA3-223ENST00000621870 CICQ96RK0 1608 aaPredicted RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 RCCD1A6NED2 376 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 HACD1B0YJ81 288 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 CCNT2O60583 730 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 SNAI1O95863 264 aaPredicted RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 ERVK-10P10266 1014 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 CPA3P15088 417 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 LMO2P25791 158 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 LSP1P33241 339 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 LBX1P52954 281 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 RABGGTBP53611 331 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 NME5P56597 212 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 TAS2R40P59535 323 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 SMARCB1Q12824 385 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 HIC1Q14526 733 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 KCTD19Q17RG1 926 aaPredicted RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 PMF1Q6P1K2 205 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 NLRP9Q7RTR0 991 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 EFL1Q7Z2Z2 1120 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 NTPCRQ9BSD7 190 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 C11orf84Q9BUA3 381 aaPredicted RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 CCDC90BQ9GZT6 254 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 ATP13A3Q9H7F0 1226 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 BPIFA1Q9NP55 256 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 NDE1Q9NXR1 346 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 NCKIPSDQ9NZQ3 722 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 KIF17Q9P2E2 1029 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 LMO7Q8WWI1 1683 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 PARP4Q9UKK3 1724 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 C1orf232A0A0U1RR37 186 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 SYCE1LA8MT33 242 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 DHX15O43143 795 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 KATNA1O75449 491 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 CTPS1P17812 591 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 TKTP29401 623 aaKnown RBP9.41□□□□□ -0.9
GGA3-223ENST00000621870 FMO4P31512 558 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 NPY2RP49146 381 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 KCNK10P57789 538 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 HPCAP84074 193 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 PARP6Q2NL67 630 aa9.41□□□□□ -0.9
GGA3-223ENST00000621870 TIGD5Q53EQ6 642 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms