RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 UGT1A9O60656 530 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 RTN3O95197 1032 aaPredicted RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 TPH1P17752 444 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 RPA3P35244 121 aaPredicted RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 RPL10AP62906 217 aaKnown RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 PPIDQ08752 370 aaKnown RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 BTG3Q14201 252 aaPredicted RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 PRPSAP1Q14558 356 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 TNFAIP8L3Q5GJ75 292 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 RASIP1Q5U651 963 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 ITPRIPL1Q6GPH6 555 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 ZNF534Q76KX8 674 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 OTOP3Q7RTS5 596 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 CHSY1Q86X52 802 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 CACNA2D3Q8IZS8 1091 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 MCUQ8NE86 351 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 CABS1Q96KC9 395 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 IQCGQ9H095 443 aaKnown RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 NSRP1Q9H0G5 558 aaKnown RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 OSBPL2Q9H1P3 480 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 UGT1A7Q9HAW7 530 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 UGT1A10Q9HAW8 530 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 UGT1A8Q9HAW9 530 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 CYP4F11Q9HBI6 524 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 FGFR1OP2Q9NVK5 253 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 SYBUQ9NX95 663 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 ARHGEF38Q9NXL2 777 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 FAM169AQ9Y6X4 670 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 ZNF638Q14966 1978 aaKnown RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 SDR42E2A6NKP2 422 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 SPAG6O75602 509 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 HCAR3P49019 387 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 IL9RQ01113 521 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 GALNT2Q10471 571 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 LRRC6Q86X45 466 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 GSDMBQ8TAX9 411 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 RPRD1AQ96P16 312 aaPredicted RBP10.17□□□□□ -0.78
VTA1-205ENST00000620996 HAPLN3Q96S86 360 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 TMEM175Q9BSA9 504 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 PHACTR1Q9C0D0 580 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 SLC39A8Q9C0K1 460 aa10.17□□□□□ -0.78
VTA1-205ENST00000620996 SLC38A8A6NNN8 435 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 TRIM49D1C9J1S8 452 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 SCAMP3O14828 347 aaKnown RBP10.16□□□□□ -0.78
VTA1-205ENST00000620996 TLR5O60602 858 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 CLTBP09497 229 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 IRF1P10914 325 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 HAPLN1P10915 354 aaPredicted RBP10.16□□□□□ -0.78
VTA1-205ENST00000620996 CSF2RAP15509 400 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 MAGEA11P43364 429 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 DEFB103AP81534 67 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 C11orf91Q3C1V1 193 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 PIK3R6Q5UE93 754 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 ARMCX6Q7L4S7 300 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 ANKRD33Q7Z3H0 272 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 TDRPQ86YL5 185 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 SCML4Q8N228 414 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 IPMKQ8NFU5 416 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 DCAKDQ8WVC6 231 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 PABPC5Q96DU9 382 aaKnown RBP10.16□□□□□ -0.78
VTA1-205ENST00000620996 ATXN7L3BQ96GX2 97 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 SIGLEC10Q96LC7 697 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 TXNDC16Q9P2K2 825 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 KCNU1A8MYU2 1149 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 IGLV3-25P01717 112 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 F7P08709 466 aaPredicted RBP10.16□□□□□ -0.78
VTA1-205ENST00000620996 SLC2A3P11169 496 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 RAG1P15918 1043 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 DRD4P21917 467 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 MRPL58Q14197 206 aaKnown RBP10.16□□□□□ -0.78
VTA1-205ENST00000620996 PCSK7Q16549 785 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 MROH9Q5TGP6 573 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 CNKSR3Q6P9H4 555 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 ADGRD1Q6QNK2 874 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 MICALCLQ6ZW33 695 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 OTOP2Q7RTS6 562 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 ATP6V0D2Q8N8Y2 350 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 SPATA22Q8NHS9 363 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 ZNF669Q96BR6 464 aaPredicted RBP10.16□□□□□ -0.78
VTA1-205ENST00000620996 CENPTQ96BT3 561 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 HDAC11Q96DB2 347 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 SEC16BQ96JE7 1060 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 SLC13A1Q9BZW2 595 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 SPATS2LQ9NUQ6 558 aaKnown RBP10.16□□□□□ -0.78
VTA1-205ENST00000620996 TLR6Q9Y2C9 796 aa10.16□□□□□ -0.78
VTA1-205ENST00000620996 GOLGA6L7A0A1B0GV03 622 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 PRRG1O14668 218 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 FGF10O15520 208 aaPredicted RBP10.15□□□□□ -0.78
VTA1-205ENST00000620996 LPXNO60711 386 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 PMPCBO75439 489 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 PYGBP11216 843 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 CCNB1P14635 433 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 ZNF135P52742 658 aaPredicted RBP10.15□□□□□ -0.78
VTA1-205ENST00000620996 IRX1P78414 480 aaPredicted RBP10.15□□□□□ -0.78
VTA1-205ENST00000620996 PLD1Q13393 1074 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 TEX44Q53QW1 395 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 LRRC8BQ6P9F7 803 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 LVRNQ6Q4G3 990 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 SLC26A11Q86WA9 606 aa10.15□□□□□ -0.78
VTA1-205ENST00000620996 RASSF3Q86WH2 238 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms