RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 DONSONQ9NYP3 566 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 GGA2Q9UJY4 613 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 SLC27A6Q9Y2P4 619 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 ILVBLA1L0T0 632 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 TBC1D3BA6NDS4 549 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 ZNF487B1APH4 448 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 KCNK3O14649 394 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 KAT7O95251 611 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 MZF1P28698 734 aaPredicted RBP16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 CETN2P41208 172 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 GRIA2P42262 883 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 COPS2P61201 443 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 GRSF1Q12849 480 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 TAZQ16635 292 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 GEN1Q17RS7 908 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 PREPLQ4J6C6 727 aaPredicted RBP16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 DCAF12L1Q5VU92 463 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 C1orf228Q6PIY5 440 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 TMCO3Q6UWJ1 677 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 ZNF852Q6ZMS4 543 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 SFTPA1Q8IWL2 248 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 APCDD1Q8J025 514 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 TERB1Q8NA31 727 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 NETO2Q8NC67 525 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 CELF6Q96J87 481 aaKnown RBP16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 WDR24Q96S15 920 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 PSMB7Q99436 277 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 FEM1AQ9BSK4 669 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 SPON2Q9BUD6 331 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 HEMGNQ9BXL5 484 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 MUC3BQ9H195 1237 aa16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 NOL6Q9H6R4 1146 aaKnown RBP16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 NDRG2Q9UN36 371 aaKnown RBP16.03■□□□□ 0.16
PCDHGC3-204ENST00000617222 TICRRQ7Z2Z1 1910 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 hCG_1818297A0A087WSY0 165 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 A0A0D9SEW6 157 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 PRRT4C9JH25 899 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 RAMP2O60895 175 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 ATP1A1P05023 1023 aaKnown RBP16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 STARD6P59095 220 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 DYNLT1P63172 113 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 GNA12Q03113 381 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 SIGLEC14Q08ET2 396 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 POLD3Q15054 466 aaPredicted RBP16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 PPP2R5EQ16537 467 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 TFDP3Q5H9I0 405 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 TMEM196Q5HYL7 178 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 PITRM1Q5JRX3 1037 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 FSTL4Q6MZW2 842 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 KIAA0907Q7Z7F0 614 aaPredicted RBP16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 SUGP1Q8IWZ8 645 aaKnown RBP16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 UMODL1-AS1Q8N2C9 162 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 LZTR1Q8N653 840 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 OR7D4Q8NG98 312 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 WFIKKN2Q8TEU8 576 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 ALG14Q96F25 216 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 OSBPL8Q9BZF1 889 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 SLC39A8Q9C0K1 460 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 KLC2Q9H0B6 622 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 INTS6Q9UL03 887 aaKnown RBP16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 OR51B4Q9Y5P0 310 aa16.02■□□□□ 0.16
PCDHGC3-204ENST00000617222 F5P12259 2224 aa16.02■□□□□ 0.15
PCDHGC3-204ENST00000617222 A0A0A0MRY4 1105 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 RASA4BC9J798 803 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 STK25O00506 426 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 APOL1O14791 398 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 RASA4O43374 803 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 CST8O60676 142 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 EGFP01133 1207 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 ALADP13716 330 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 DRD1P21728 446 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 ACVRL1P37023 503 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 NDST2P52849 883 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 PLK1P53350 603 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 YBEYP58557 167 aaPredicted RBP16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 ADCY2Q08462 1091 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 SLC12A1Q13621 1099 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 TFDP2Q14188 446 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 PAFAH1B3Q15102 231 aaKnown RBP16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 PLEKHG6Q3KR16 790 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 FUT11Q495W5 492 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 TMEM215Q68D42 235 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 MBLAC2Q68D91 279 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 NCBP2-AS2Q69YL0 99 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 SLC9A4Q6AI14 798 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 ZNF783Q6ZMS7 281 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 TRIM67Q6ZTA4 783 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 NUDT18Q6ZVK8 323 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 ADIPOR2Q86V24 386 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 ZSCAN30Q86W11 494 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 TP53INP2Q8IXH6 220 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 AHI1Q8N157 1196 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 NPWQ8N729 165 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 EZH1Q92800 747 aaPredicted RBP16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 ARHGEF2Q92974 986 aaKnown RBP16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 HMCESQ96FZ2 354 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 MAGEH1Q9H213 219 aa16.01■□□□□ 0.15
PCDHGC3-204ENST00000617222 LRRC19Q9H756 370 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms