RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 TBX21Q9UL17 535 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 ATP11BQ9Y2G3 1177 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 RRP15Q9Y3B9 282 aaKnown RBP11.72□□□□□ -0.53
LINC01278-204ENST00000609143 FAM169AQ9Y6X4 670 aa11.72□□□□□ -0.53
LINC01278-204ENST00000609143 NUP205Q92621 2012 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 SHROOM3Q8TF72 1996 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 ATXN2Q99700 1313 aaKnown RBP11.71□□□□□ -0.53
LINC01278-204ENST00000609143 FAM159BA6NKW6 160 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 ASMTLO95671 621 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 RPA3P35244 121 aaPredicted RBP11.71□□□□□ -0.53
LINC01278-204ENST00000609143 RFC2P35250 354 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 WDR4P57081 412 aaKnown RBP11.71□□□□□ -0.53
LINC01278-204ENST00000609143 PSMD5Q16401 504 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 C10orf120Q5SQS8 335 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 SLC8B1Q6J4K2 584 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 SRLQ86TD4 932 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 LRRC49Q8IUZ0 686 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 ARHGAP12Q8IWW6 846 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 CABS1Q96KC9 395 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 CEP295NLQ96MC4 621 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 TMEM39AQ9NV64 488 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 BACE2Q9Y5Z0 518 aa11.71□□□□□ -0.53
LINC01278-204ENST00000609143 WASH4PA8MWX3 477 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 CXorf49A8MYA2 514 aaPredicted RBP11.71□□□□□ -0.54
LINC01278-204ENST00000609143 PSMD3O43242 534 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 KRT38O76015 456 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 SNRPAP09012 282 aaKnown RBP11.71□□□□□ -0.54
LINC01278-204ENST00000609143 CD68P34810 354 aaPredicted RBP11.71□□□□□ -0.54
LINC01278-204ENST00000609143 PIK3R6Q5UE93 754 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 HHATQ5VTY9 493 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 KIAA1841Q6NSI8 718 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 TIGD7Q6NT04 549 aaPredicted RBP11.71□□□□□ -0.54
LINC01278-204ENST00000609143 TRMT10BQ6PF06 316 aaKnown RBP11.71□□□□□ -0.54
LINC01278-204ENST00000609143 C14orf80Q86SX3 495 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 MIB1Q86YT6 1006 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 ANKS4BQ8N8V4 417 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 CCDC197Q8NCU1 140 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 CDKL2Q92772 493 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 DPF3Q92784 378 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 IGSF21Q96ID5 467 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 BTN2A3PQ96KV6 586 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 GORASP1Q9BQQ3 440 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 MOCS1Q9NZB8 636 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 BFARQ9NZS9 450 aa11.71□□□□□ -0.54
LINC01278-204ENST00000609143 GOLGA6L7A0A1B0GV03 622 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 SLC38A8A6NNN8 435 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 AP3B1O00203 1094 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 TM9SF1O15321 606 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 CCNB1P14635 433 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 TUFMP49411 452 aaKnown RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 SERPINB9P50453 376 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 CRADDP78560 199 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 SPOUT1Q5T280 376 aaKnown RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 ACBD5Q5T8D3 534 aaPredicted RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 RASIP1Q5U651 963 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 KCTD11Q693B1 232 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 BANPQ8N9N5 519 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 DNAAF3Q8N9W5 541 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 OR52K1Q8NGK4 314 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 GIPC2Q8TF65 315 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 TTC17Q96AE7 1141 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 MTBPQ96DY7 904 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 TRIM56Q9BRZ2 755 aaKnown RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 SLC39A8Q9C0K1 460 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 CWH43Q9H720 699 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 LRRC40Q9H9A6 602 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 SMYD2Q9NRG4 433 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 PIH1D1Q9NWS0 290 aaKnown RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 SYBUQ9NX95 663 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 MPP6Q9NZW5 540 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 GREB1Q4ZG55 1949 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 TRIM49D1C9J1S8 452 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 MATN3O15232 486 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 ALDH1A2O94788 518 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 EFEMP2O95967 443 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 POLBP06746 335 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 CSH1P0DML2 217 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 CSH2P0DML3 217 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 KPNA1P52294 538 aaPredicted RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 MTA1Q13330 715 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 MS4A13Q5J8X5 152 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 AFMIDQ63HM1 303 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 PIGWQ7Z7B1 504 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 ARNTL2Q8WYA1 636 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 PPP1R2P1Q96PQ5 205 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 CDK5RAP1Q96SZ6 601 aaKnown RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 ELAC2Q9BQ52 826 aaKnown RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 MLPHQ9BV36 600 aaPredicted RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 UBE2OQ9C0C9 1292 aaKnown RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 ZYG11BQ9C0D3 744 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 CASS4Q9NQ75 786 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 FGFR1OP2Q9NVK5 253 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 PPARGC1AQ9UBK2 798 aaKnown RBP11.7□□□□□ -0.54
LINC01278-204ENST00000609143 VANGL2Q9ULK5 521 aa11.7□□□□□ -0.54
LINC01278-204ENST00000609143 BRCA2P51587 3418 aa11.69□□□□□ -0.54
LINC01278-204ENST00000609143 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.69□□□□□ -0.54
LINC01278-204ENST00000609143 SLC12A8A0AV02 714 aa11.69□□□□□ -0.54
LINC01278-204ENST00000609143 GOLGA8RI6L899 631 aa11.69□□□□□ -0.54
LINC01278-204ENST00000609143 TBX18O95935 607 aa11.69□□□□□ -0.54
LINC01278-204ENST00000609143 CLTBP09497 229 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms