RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 NRG1Q02297 640 aaPredicted RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 CAMK2GQ13555 558 aaPredicted RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 BYSLQ13895 437 aaKnown RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 MAP7D1Q3KQU3 841 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 PLK5Q496M5 336 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 RNF219Q5W0B1 726 aaPredicted RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 KIAA1324Q6UXG2 1013 aaKnown RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 TFAP2DQ7Z6R9 452 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 SLFN11Q7Z7L1 901 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 C11orf74Q86VG3 221 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 DRC7Q8IY82 874 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 DCLK2Q8N568 766 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 ALG14Q96F25 216 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 MYO19Q96H55 970 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 ZC3H10Q96K80 434 aaKnown RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 MRGPRX3Q96LB0 322 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 PPP1R9BQ96SB3 815 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 FEM1AQ9BSK4 669 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 MAGEB5Q9BZ81 275 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 ZYG11BQ9C0D3 744 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 MKRN2Q9H000 416 aaKnown RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 PPARGC1AQ9UBK2 798 aaKnown RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 OR12D3Q9UGF7 316 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 SUN2Q9UH99 717 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 PTPRZ1P23471 2315 aaPredicted RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 TNRC6BQ9UPQ9 1833 aaKnown RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 MFAP3LO75121 409 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 SRPRAP08240 638 aaKnown RBP14.24□□□□□ -0.13
UPF1-205ENST00000598209 COPAP53621 1224 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 ADKP55263 362 aaKnown RBP14.24□□□□□ -0.13
UPF1-205ENST00000598209 SULT2A1Q06520 285 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 ZNF252P-AS1Q0IIN9 211 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 SCAPQ12770 1279 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 ARID5BQ14865 1188 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 ELF2Q15723 593 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 TSR1Q2NL82 804 aaKnown RBP14.24□□□□□ -0.13
UPF1-205ENST00000598209 CCDC122Q5T0U0 273 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 MANEALQ5VSG8 457 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 ALKBH5Q6P6C2 394 aaKnown RBP14.24□□□□□ -0.13
UPF1-205ENST00000598209 SETD3Q86TU7 594 aaPredicted RBP14.24□□□□□ -0.13
UPF1-205ENST00000598209 GAS2L3Q86XJ1 694 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 TMPRSS6Q8IU80 811 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 FRMD1Q8N878 549 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 OR2T3Q8NH03 318 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 RPL10LQ96L21 214 aaKnown RBP14.24□□□□□ -0.13
UPF1-205ENST00000598209 TRIM7Q9C029 511 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 MUC3BQ9H195 1237 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 DUSP15Q9H1R2 295 aaPredicted RBP14.24□□□□□ -0.13
UPF1-205ENST00000598209 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 MRPL47Q9HD33 250 aaKnown RBP14.24□□□□□ -0.13
UPF1-205ENST00000598209 ABHD10Q9NUJ1 306 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 ZNHIT6Q9NWK9 470 aaKnown RBP14.24□□□□□ -0.13
UPF1-205ENST00000598209 OR51B4Q9Y5P0 310 aa14.24□□□□□ -0.13
UPF1-205ENST00000598209 EP300Q09472 2414 aaPredicted RBP14.24□□□□□ -0.13
UPF1-205ENST00000598209 TTC34A8MYJ7 566 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 FAM72CH0Y354 149 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 ZNF217O75362 1048 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 RHOBTB1O94844 696 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 LRIG2O94898 1065 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 RETP07949 1114 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 OR1E1P30953 314 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 STK19P49842 368 aaPredicted RBP14.23□□□□□ -0.13
UPF1-205ENST00000598209 EFHC2Q5JST6 749 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 C6orf118Q5T5N4 469 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 FAM72AQ5TYM5 149 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 FAM72DQ6L9T8 149 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 RWDD4Q6NW29 188 aaKnown RBP14.23□□□□□ -0.13
UPF1-205ENST00000598209 FAM72BQ86X60 149 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 KDM1BQ8NB78 822 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 FNIP1Q8TF40 1166 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 PRCCQ92733 491 aaPredicted RBP14.23□□□□□ -0.13
UPF1-205ENST00000598209 TBC1D31Q96DN5 1066 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 SIPA1Q96FS4 1042 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 LOXL4Q96JB6 756 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 THAP2Q9H0W7 228 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 MTG2Q9H4K7 406 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 CD93Q9NPY3 652 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 PRSS16Q9NQE7 514 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 ZNF212Q9UDV6 495 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 SLCO3A1Q9UIG8 710 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 MBD1Q9UIS9 605 aaPredicted RBP14.23□□□□□ -0.13
UPF1-205ENST00000598209 VPS28Q9UK41 221 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 FZD10Q9ULW2 581 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 NENFQ9UMX5 172 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 CYP8B1Q9UNU6 501 aa14.23□□□□□ -0.13
UPF1-205ENST00000598209 IGHV1OR15-9A0A0B4J2B8 117 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 SSU72P8A0A1W2PR75 194 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 MAP3K13O43283 966 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 RNF8O76064 485 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 EPN2O95208 641 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 L1CAMP32004 1257 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 NNMTP40261 264 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 GALCP54803 685 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 AIF1P55008 147 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 GFPT1Q06210 699 aaPredicted RBP14.22□□□□□ -0.13
UPF1-205ENST00000598209 TBX2Q13207 712 aaPredicted RBP14.22□□□□□ -0.13
UPF1-205ENST00000598209 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
UPF1-205ENST00000598209 HNRNPA1L2Q32P51 320 aaKnown RBP14.22□□□□□ -0.13
UPF1-205ENST00000598209 PMS2CLQ68D20 193 aa14.22□□□□□ -0.13
UPF1-205ENST00000598209 METTL3Q86U44 580 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms